Stylized facts of financial time series and hidden semi-Markov models. - Jan Bulla; Ingo Bulla (Comput. Stat. Data Anal., 2006)

Computational issues in parameter estimation for stationary hidden Markov models. - Jan Bulla; Andreas Berzel (Comput. Stat., 2008)

hsmm - An R package for analyzing hidden semi-Markov models. - Jan Bulla; Ingo Bulla; Oleg Nenadic (Comput. Stat. Data Anal., 2010)

Detection of viral sequence fragments of HIV-1 subfamilies yet unknown. - Thomas Unterthiner; Anne-Kathrin Schultz; Jan Bulla; Burkhard Morgenstern; Mario Stanke; Ingo Bulla (BMC Bioinform., 2011)

Notos - a galaxy tool to analyze CpN observed expected ratios for inferring DNA methylation types. - Ingo Bulla; Benoît Aliaga; Virginia Lacal; Jan Bulla; Christoph Grunau; Cristian Chaparro (BMC Bioinform., 2018)