IPH-TRIM3D-PCLake: A three-dimensional complex dynamic model for subtropical aquatic ecosystems. - Carlos R. Fragoso Jr.; Egbert H. van Nes; Jan H. Janse; David da Motta Marques (Environ. Model. Softw., 2009)

Potential effects of climate change and eutrophication on a large subtropical shallow lake. - Carlos R. Fragoso Jr.; David M. L. Motta Marques; Tiago Finkler Ferreira; Jan H. Janse; Egbert H. van Nes (Environ. Model. Softw., 2011)

Serving many at once: How a database approach can create unity in dynamical ecosystem modelling. - Wolf M. Mooij; Robert J. Brederveld; Jeroen J. M. de Klein; Don L. DeAngelis; Andrea S. Downing; Michiel Faber; Daan J. Gerla; Matthew R. Hipsey; Jochem 't Hoen; Jan H. Janse; Annette B. G. Janssen; Michel Jeuken; et al. (Environ. Model. Softw., 2014)

Extending one-dimensional models for deep lakes to simulate the impact of submerged macrophytes on water quality. - René Sachse; Thomas Petzoldt; Maria Blumstock; Santiago Moreira; Marlene Pätzig; Jacqueline Rücker; Jan H. Janse; Wolf M. Mooij; Sabine Hilt (Environ. Model. Softw., 2014)

Advancing projections of phytoplankton responses to climate change through ensemble modelling. - Dennis Trolle; J. Alex Elliott; Wolf M. Mooij; Jan H. Janse; Karsten Bolding; David P. Hamilton; Erik Jeppesen (Environ. Model. Softw., 2014)

A system of metrics for the assessment and improvement of aquatic ecosystem models. - Matthew R. Hipsey; Gideon Gal; George B. Arhonditsis; Cayelan C. Carey; J. Alex Elliott; Marieke A. Frassl; Jan H. Janse; Lee de Mora; Barbara J. Robson (Environ. Model. Softw., 2020)