Prediction of Co-Receptor Usage of HIV-1 from Genotype. - Jan Nikolaj Dybowski; Dominik Heider; Daniel Hoffmann (PLoS Comput. Biol., 2010)

Computational Design of a DNA- and Fc-Binding Fusion Protein. - Jonas Winkler; Giuliano Armano; Jan Nikolaj Dybowski; Oliver Kuhn; Filippo Ledda; Dominik Heider (Adv. Bioinformatics, 2011)

Improved Bevirimat resistance prediction by combination of structural and sequence-based classifiers. - Jan Nikolaj Dybowski; Mona Riemenschneider; Sascha Hauke; Martin Pyka; Jens Verheyen; Daniel Hoffmann; Dominik Heider (BioData Min., 2011)

Unsupervised Dimension Reduction Methods for Protein Sequence Classification. - Dominik Heider; Christoph Bartenhagen; Jan Nikolaj Dybowski; Sascha Hauke; Martin Pyka; Daniel Hoffmann (GfKl, 2012)

A simple structure-based model for the prediction of HIV-1 co-receptor tropism. - Dominik Heider; Jan Dybowski; Christoph Wilms; Daniel Hoffmann (BioData Min., 2014)

Locating Large, Flexible Ligands on Proteins. - Jean-Noël Grad; Alba Gigante; Christoph Wilms; Jan Nikolaj Dybowski; Ludwig Ohl; Christian Ottmann; Carsten Schmuck; Daniel Hoffmann (J. Chem. Inf. Model., 2018)