BiGG: a Biochemical Genetic and Genomic knowledgebase of large scale metabolic reconstructions. - Jan Schellenberger; Junyoung O. Park; Tom M. Conrad; Bernhard O. Palsson (BMC Bioinform., 2010)

Predicting outcomes of steady-state 13C isotope tracing experiments using Monte Carlo sampling. - Jan Schellenberger; Daniel C. Zielinski; Wing Choi; Sunthosh Madireddi; Vasiliy Portnoy; David A. Scott; Jennifer L. Reed; Andrei Osterman; Bernhard Ø. Palsson (BMC Syst. Biol., 2012)

Using Machine Learning to Detect Cancer Early. - Jan Schellenberger (KDD, 2020)