Graph-based analysis and visualization of experimental results with ONDEX. - Jacob Köhler; Jan Baumbach; Jan Taubert; Michael Specht; Andre Skusa; Alexander Rüegg; Christopher J. Rawlings; Paul Verrier; Stephan Philippi (Bioinform., 2006)

The OXL format for the exchange of integrated datasets. - Jan Taubert; Klaus Peter Sieren; Matthew Hindle; Berend Hoekman; Rainer Winnenburg; Stephan Philippi; Christopher J. Rawlings; Jacob Köhler (J. Integr. Bioinform., 2007)

Wheat Estimated Transcript Server (WhETS): a tool to provide best estimate of hexaploid wheat transcript sequence. - Rowan A. C. Mitchell; Nathalie Castells-Brooke; Jan Taubert; Paul Verrier; David J. Leader; Christopher J. Rawlings (Nucleic Acids Res., 2007)

Graph-based sequence annotation using a data integration approach. - Robert Pesch; Artem Lysenko; Matthew Hindle; Keywan Hassani-Pak; Ralf Thiele; Christopher J. Rawlings; Jacob Köhler; Jan Taubert (J. Integr. Bioinform., 2008)

Linking Life Sciences Data Using Graph-Based Mapping. - Jan Taubert; Matthew Hindle; Artem Lysenko; Jochen Weile; Jacob Köhler; Christopher J. Rawlings (DILS, 2009)

Data integration for plant genomics - exemplars from the integration of Arabidopsis thaliana databases. - Artem Lysenko; Matthew Morritt Hindle; Jan Taubert; Mansoor A. S. Saqi; Christopher J. Rawlings (Briefings Bioinform., 2009)

Variation of Background Knowledge in an Industrial Application of ILP. - Stephen H. Muggleton; Jianzhong Chen; Hiroaki Watanabe; Stuart J. Dunbar; Charles Baxter; Richard A. Currie; José Domingo Salazar; Jan Taubert; Michael J. E. Sternberg (ILP, 2010)

Ondex - A life science data integration framework. - Jan Taubert (GI-Jahrestagung, 2011)

Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis. - Artem Lysenko; Michael Defoin-Platel; Keywan Hassani-Pak; Jan Taubert; Charlie Hodgman; Christopher J. Rawlings; Mansoor A. S. Saqi (BMC Bioinform., 2011)

WIBL: Workbench for Integrative Biological Learning. - Victor Lesk; Jan Taubert; Christopher J. Rawlings; Stuart J. Dunbar; Stephen H. Muggleton (J. Integr. Bioinform., 2011)

ONDEX - a data integration framework for the life sciences. - Jan Taubert (2011)

How Little Do We Actually Know? On the Size of Gene Regulatory Networks. - Richard Röttger; Ulrich Rückert 002; Jan Taubert; Jan Baumbach (IEEE ACM Trans. Comput. Biol. Bioinform., 2012)

Molecular Information Fusion in Ondex. - Jan Taubert; Jacob Köhler (Approaches in Integrative Bioinformatics, 2014)

Ondex Web: web-based visualization and exploration of heterogeneous biological networks. - Jan Taubert; Keywan Hassani-Pak; Nathalie Castells-Brooke; Christopher J. Rawlings (Bioinform., 2014)

Expression Atlas update - a database of gene and transcript expression from microarray- and sequencing-based functional genomics experiments. - Robert Petryszak; Tony Burdett; Benedetto Fiorelli; Nuno A. Fonseca; Mar Gonzalez-Porta; Emma Hastings; Wolfgang Huber; Simon Jupp; Maria Keays; Nataliya Kryvych; Julie A. McMurry; John C. Marioni; et al. (Nucleic Acids Res., 2014)

Integrative Bioinformatics: History and Future. - Ming Chen 005; Ralf Hofestädt; Jan Taubert (J. Integr. Bioinform., 2019)