Extraction of Chondromalacia Knee Cartilage Using Multi Slice Thresholding Method. - Jan Kubícek; Jan Valosek; Marek Penhaker; Iveta Bryjova (ICCASA, 2015)

Segmentation of Vascular Calcifications and Statistical Analysis of Calcium Score. - Jan Kubícek; Iveta Bryjova; Jan Valosek; Marek Penhaker; Martin Augustynek; Martin Cerný 002; Vladimir Kasik (ACIIDS (2), 2017)

Modeling and objectification of blood vessel calcification with using of multiregional segmentation. - Jan Kubícek; Iveta Bryjova; Jan Valosek; Marek Penhaker; Martin Augustynek; Martin Cerný 002; Vladimir Kasik; David Oczka (Vietnam. J. Comput. Sci., 2018)

SCIsegV2: A Universal Tool for Segmentation of Intramedullary Lesions in Spinal Cord Injury. - Enamundram Naga Karthik; Jan Valosek; Lynn Farner; Dario Pfyffer; Simon Schading-Sassenhausen; Anna Lebret; Gergely Dávid; Andrew C. Smith; Kenneth Arnold Weber II; Maryam Seif; Patrick Freund; Julien Cohen-Adad (AMAI@MICCAI, 2024)

Automatic Segmentation of the Spinal Cord Nerve Rootlets. - Jan Valosek; Theo Mathieu; Raphaelle Schlienger; Olivia S. Kowalczyk; Julien Cohen-Adad (CoRR, 2024)

SCIsegV2: A Universal Tool for Segmentation of Intramedullary Lesions in Spinal Cord Injury. - Enamundram Naga Karthik; Jan Valosek; Lynn Farner; Dario Pfyffer; Simon Schading-Sassenhausen; Anna Lebret; Gergely Dávid; Andrew C. Smith; Kenneth Arnold Weber II; Maryam Seif; RHSCIR Network Imaging Group; Patrick Freund; et al. (CoRR, 2024)

Rootlets-based registration to the spinal cord PAM50 template. - Sandrine Bédard; Jan Valosek; Valeria Oliva; Kenneth Arnold Weber II; Julien Cohen-Adad (CoRR, 2025)

Monitoring morphometric drift in lifelong learning segmentation of the spinal cord. - Enamundram Naga Karthik; Sandrine Bédard; Jan Valosek; Christoph S. Aigner; Elise Bannier; Josef Bednarík; Virginie Callot; Anna J. E. Combes; Armin Curt; Gergely Dávid; Falk Eippert; Lynn Farner; et al. (CoRR, 2025)