PatchProt: Hydrophobic patch prediction using protein foundation models. - Dea Gogishvili; Emmanuel Minois-Genin; Jan van Eck; Sanne Abeln (CoRR, 2024)

PLM-eXplain: Divide and Conquer the Protein Embedding Space. - Jan van Eck; Dea Gogishvili; Wilson Silva; Sanne Abeln (CoRR, 2025)