Multiple sequence alignment with user-defined constraints. - Burkhard Morgenstern; Sonja J. Prohaska; Nadine Werner; Jan Weyer-Menkhoff; Isabelle Schneider; Amarendran Ramaswami Subramanian; Peter F. Stadler (German Conference on Bioinformatics, 2004)

Multiple sequence alignment with user-defined constraints at GOBICS. - Burkhard Morgenstern; Nadine Werner; Sonja J. Prohaska; Rasmus Steinkamp; Isabelle Schneider; Amarendran Ramaswami Subramanian; Peter F. Stadler; Jan Weyer-Menkhoff (Bioinform., 2005)

DIALIGN-T: An improved algorithm for segment-based multiple sequence alignment. - Amarendran Ramaswami Subramanian; Jan Weyer-Menkhoff; Michael Kaufmann 001; Burkhard Morgenstern (BMC Bioinform., 2005)

Integer linear programming as a tool for constructing trees from quartet data. - Jan Weyer-Menkhoff; Claudine Devauchelle; Alexander Grossmann; Stefan Grünewald (Comput. Biol. Chem., 2005)

Delta additive and Delta ultra-additive maps, Gromov's trees, and the Farris transform. - Andreas W. M. Dress; Barbara R. Holland; Katharina T. Huber; Jack H. Koolen; Vincent Moulton; Jan Weyer-Menkhoff (Discret. Appl. Math., 2005)