On Two-Dimensional Pattern Matching by Finite Automata. - Jan Zdárek; Borivoj Melichar (CIAA, 2005)

Pattern Matching in DCA Coded Text. - Jan Lahoda; Borivoj Melichar; Jan Zdárek (CIAA, 2008)

A Note on a Tree-Based 2D Indexing. - Jan Zdárek; Borivoj Melichar (CIAA, 2010)

Tree-Based 2D Indexing. - Jan Zdárek; Borivoj Melichar (Int. J. Found. Comput. Sci., 2011)

Tree template matching in unranked ordered trees. - Michalis Christou; Tomás Flouri; Costas S. Iliopoulos; Jan Janousek; Borivoj Melichar; Solon P. Pissis; Jan Zdárek (J. Discrete Algorithms, 2013)

Simple tree pattern matching for trees in the prefix bar notation. - Jan Lahoda; Jan Zdárek (Discret. Appl. Math., 2014)