Parallel methods for calculation of long-range electrostatic interactions. - Jana Pazúriková; Ludek Matyska (CoRR, 2013)

Large-Scale Molecular Dynamics Simulations for Highly Parallel Infrastructures. - Jana Pazúriková (CoRR, 2014)

NEEMP: software for validation, accurate calculation and fast parameterization of EEM charges. - Tomás Racek; Jana Pazúriková; Radka Svobodová Vareková; Stanislav Geidl; Ales Krenek; Francesco L. Falginella; Vladimír Horský; Václav Hejret; Jaroslav Koca (J. Cheminformatics, 2016)

Acceleration of Mean Square Distance Calculations with Floating Close Structure in Metadynamics Simulations. - Jana Pazúriková; Jaroslav Olha; Ales Krenek; Vojtech Spiwok (CoRR, 2018)