Secondary use of clinical data: The Vanderbilt approach. - Ioana Danciu; James D. Cowan; Melissa A. Basford; Xiaoming Wang; Alexander Saip; Susan Osgood; Jana Shirey-Rice; Jacqueline Kirby; Paul A. Harris (J. Biomed. Informatics, 2014)

PheWAS Network Analysis and Visualization. - Yaomin Xu; Todd L. Edwards; Lisa Bastarache; Rebecca N. Jerome; Shilin Zho; Eric Torstenson; Wei-Qi Wei; Jana Shirey-Rice; Erica A. Bowton; Yu Shyr; Jill M. Pulley; Joshua C. Denny (AMIA, 2015)

Large-Scale Text Mining of Social Determinants from Electronic Health Records: Case Studies of Homelessness and Adverse Childhood Experiences. - Cosmin Adrian Bejan; John Angiolillo; Douglas Conway; Robertson Nash; Jana Shirey-Rice; Loren Lipworth-Elliot; Robert M. Cronin; Jill M. Pulley; Sunil Kripalani; Shari Barkin; Kevin B. Johnson; Joshua C. Denny (AMIA, 2017)

Systematically Prioritizing Targets in Genome-Based Drug Repurposing. - Anup P. Challa; Robert R. Lavieri; Judith T. Lewis; Nicole M. Zaleski; Jana K. Shirey-Rice; Paul A. Harris; Jill M. Pulley (BCB, 2018)

Mining 100 million notes to find homelessness and adverse childhood experiences: 2 case studies of rare and severe social determinants of health in electronic health records. - Cosmin Adrian Bejan; John Angiolillo; Douglas Conway; Robertson Nash; Jana Shirey-Rice; Loren Lipworth-Elliot; Robert M. Cronin; Jill M. Pulley; Sunil Kripalani; Shari Barkin; Kevin B. Johnson; Joshua C. Denny (J. Am. Medical Informatics Assoc., 2018)

PheWAS-ME: a web-app for interactive exploration of multimorbidity patterns in PheWAS. - Nick Strayer; Jana K. Shirey-Rice; Yu Shyr; Joshua C. Denny; Jill M. Pulley; Yaomin Xu (Bioinform., 2021)

Interactive network-based clustering and investigation of multimorbidity association matrices with associationSubgraphs. - Nick Strayer; Siwei Zhang; Lydia Yao; Tess Vessels; Cosmin Adrian Bejan; Ryan S. Hsi; Jana K. Shirey-Rice; Justin M. Balko; Douglas B. Johnson; Elizabeth J. Phillips; Alex Bick; Todd L. Edwards; et al. (Bioinform., 2023)