Reduced amino acid alphabets exhibit an improved sensitivity and selectivity in fold assignment. - Eric L. Peterson; Jané Kondev; Julie A. Theriot; Rob Phillips (Bioinform., 2009)

Effect of Promoter Architecture on the Cell-to-Cell Variability in Gene Expression. - Alvaro Sanchez; Hernan G. Garcia; Daniel L. Jones; Rob Phillips; Jané Kondev (PLoS Comput. Biol., 2011)

Deciphering Transcriptional Dynamics In Vivo by Counting Nascent RNA Molecules. - Sandeep Choubey; Jané Kondev; Alvaro Sanchez (PLoS Comput. Biol., 2015)

Antenna Mechanism of Length Control of Actin Cables. - Lishibanya Mohapatra; Bruce L. Goode; Jané Kondev (PLoS Comput. Biol., 2015)

Control of filament length by a depolymerizing gradient. - Arnab Datta; David Harbage; Jané Kondev (PLoS Comput. Biol., 2020)

A Probabilistic Approach to Growth Networks. - Predrag R. Jelenkovic; Jané Kondev; Lishibanya Mohapatra; Petar Momcilovic (Oper. Res., 2022)