Crowd-Algorithm Collaboration for Large-Scale Endoscopic Image Annotation with Confidence. - Lena Maier-Hein; Tobias Roß; Janek Gröhl; Ben Glocker; Sebastian Bodenstedt; Christian Stock; Eric Heim; Michael Götz; Sebastian J. Wirkert; Hannes Kenngott; Stefanie Speidel; Klaus H. Maier-Hein (MICCAI (2), 2016)

Abstract: Quantitative Photoakustische Tomografie durch lokale Kontextkodierung. - Janek Gröhl; Thomas Kirchner; Lena Maier-Hein (Bildverarbeitung für die Medizin, 2017)

MITK-OpenIGTLink for combining open-source toolkits in real-time computer-assisted interventions. - Martin Klemm; Thomas Kirchner; Janek Gröhl; Dominique Cheray; Marco Nolden; Alexander Seitel; Harald Hoppe; Lena Maier-Hein; Alfred M. Franz (Int. J. Comput. Assist. Radiol. Surg., 2017)

Local context encoding enables machine learning-based quantitative photoacoustics. - Thomas Kirchner; Janek Gröhl; Lena Maier-Hein (CoRR, 2017)

Abstract: Rekonstruktion der initialen Druckverteilung photoakustischer Bilder mit limitiertem Blickwinkel durch maschinelle Lernverfahren. - Dominik Waibel; Janek Gröhl; Fabian Isensee; Klaus Hermann Maier-Hein; Lena Maier-Hein (Bildverarbeitung für die Medizin, 2018)

Confidence Estimation for Machine Learning-Based Quantitative Photoacoustics. - Janek Gröhl; Thomas Kirchner; Tim Adler; Lena Maier-Hein (J. Imaging, 2018)

Signed Real-Time Delay Multiply and Sum Beamforming for Multispectral Photoacoustic Imaging. - Thomas Kirchner; Franz Sattler; Janek Gröhl; Lena Maier-Hein (J. Imaging, 2018)

In silico 2D photoacoustic imaging data. - Janek Gröhl; Thomas Kirchner; Tim Adler; Lena Maier-Hein (Zenodo, 2018)

Live Monitoring of Haemodynamic Changes with Multispectral Image Analysis. - Leonardo A. Ayala; Sebastian J. Wirkert; Janek Gröhl; Mildred A. Herrera; Adrián Hernández-Aguilera; Anant Suraj Vemuri; Edgar Santos; Lena Maier-Hein (OR/MLCN@MICCAI, 2019)

Uncertainty-aware performance assessment of optical imaging modalities with invertible neural networks. - Tim J. Adler; Lynton Ardizzone; Anant Suraj Vemuri; Leonardo Ayala; Janek Gröhl; Thomas Kirchner; Sebastian J. Wirkert; Jakob Kruse; Carsten Rother; Ullrich Köthe; Lena Maier-Hein (Int. J. Comput. Assist. Radiol. Surg., 2019)

An open-source software platform for translational photoacoustic research and its application to motion-corrected blood oxygenation estimation. - Thomas Kirchner; Janek Gröhl; Franz Sattler; Moritz S. Bischoff; Angelika Laha; Marco Nolden; Lena Maier-Hein (CoRR, 2019)

Estimation of blood oxygenation with learned spectral decoloring for quantitative photoacoustic imaging (LSD-qPAI). - Janek Gröhl; Thomas Kirchner; Tim Adler; Lena Maier-Hein (CoRR, 2019)

Heidelberg Colorectal Data Set for Surgical Data Science in the Sensor Operating Room. - Lena Maier-Hein; Martin Wagner 001; Tobias Roß; Annika Reinke; Sebastian Bodenstedt; Peter M. Full; Hellena Hempe; Diana Mîndroc-Filimon; Patrick Scholz 001; Thuy Nuong Tran; Pierangela Bruno; Anna Kisilenko; et al. (CoRR, 2020)

Deep learning for biomedical photoacoustic imaging: A review. - Janek Gröhl; Melanie Schellenberg; Kris Dreher; Lena Maier-Hein (CoRR, 2020)

Supplementary code and data for "Learned spectral decoloring enables photoacoustic oximetry". - Janek Gröhl; Thomas Kirchner; Tim J. Adler; Lina Hacker; Niklas Holzwarth; Adrián Hernández-Aguilera; Mildred A. Herrera; Edgar Santos; Sarah E. Bohndiek; Lena Maier-Hein (Zenodo, 2020)

Invertible Neural Networks for Uncertainty Quantification in Photoacoustic Imaging. - Jan-Hinrich Nölke; Tim Adler; Janek Gröhl; Thomas Kirchner; Lynton Ardizzone; Carsten Rother; Ullrich Köthe; Lena Maier-Hein (Bildverarbeitung für die Medizin, 2021)

Tattoo tomography: Freehand 3D photoacoustic image reconstruction with an optical pattern. - Niklas Holzwarth; Melanie Schellenberg; Janek Gröhl; Kris Dreher; Jan-Hinrich Nölke; Alexander Seitel; Minu Dietlinde Tizabi; Beat P. Müller-Stich; Lena Maier-Hein (Int. J. Comput. Assist. Radiol. Surg., 2021)

Data-driven generation of plausible tissue geometries for realistic photoacoustic image synthesis. - Melanie Schellenberg; Janek Gröhl; Kris Dreher; Niklas Holzwarth; Minu Dietlinde Tizabi; Alexander Seitel; Lena Maier-Hein (CoRR, 2021)

Semantic segmentation of multispectral photoacoustic images using deep learning. - Janek Gröhl; Melanie Schellenberg; Kris Dreher; Niklas Holzwarth; Minu Dietlinde Tizabi; Alexander Seitel; Lena Maier-Hein (CoRR, 2021)

Data-driven Quantitative Photoacoustic Imaging - Janek Gröhl (2021)

Abstract: Tattoo-Tomographie - Freihand-3D-Photoakustik und multimodale Bildfusion. - Niklas Holzwarth; Melanie Schellenberg; Janek Gröhl; Kris Dreher; Jan-Hinrich Nölke; Alexander Seitel; Minu Dietlinde Tizabi; Beat P. Müller-Stich; Lena Maier-Hein (Bildverarbeitung für die Medizin, 2023)

Unsupervised Domain Transfer with Conditional Invertible Neural Networks. - Kris K. Dreher; Leonardo Ayala; Melanie Schellenberg; Marco Hübner; Jan-Hinrich Nölke; Tim J. Adler; Silvia Seidlitz; Jan Sellner; Alexander Studier-Fischer; Janek Gröhl; Felix Nickel; Ullrich Köthe; et al. (MICCAI (1), 2023)

A Study on the Adequacy of Common IQA Measures for Medical Images. - Anna Breger; Clemens Karner; Ian Selby; Janek Gröhl; Sören Dittmer; Edward Lilley; Judith Babar; Jake Beckford; Thomas R. Else; Timothy J. Sadler; Shahab Shahipasand; Arthikkaa Thavakumar; et al. (MICAD, 2024)

Distribution-informed and wavelength-flexible data-driven photoacoustic oximetry. - Janek Gröhl; Kylie Yeung; Kevin Gu; Thomas R. Else; Monika Golinska; Ellie V. Bunce; Lina Hacker; Sarah E. Bohndiek (CoRR, 2024)

A study of why we need to reassess full reference image quality assessment with medical images. - Anna Breger; Ander Biguri; Malena Sabaté Landman; Ian Selby; Nicole Amberg; Elisabeth Brunner; Janek Gröhl; Sepideh Hatamikia; Clemens Karner; Lipeng Ning; Sören Dittmer; Michael Roberts; et al. (CoRR, 2024)

A study on the adequacy of common IQA measures for medical images. - Anna Breger; Clemens Karner; Ian Selby; Janek Gröhl; Sören Dittmer; Edward Lilley; Judith Babar; Jake Beckford; Timothy J. Sadler; Shahab Shahipasand; Arthikkaa Thavakumar; Michael Roberts; et al. (CoRR, 2024)

PATATO: a Python photoacoustic tomography analysis toolkit. - Thomas R. Else; Janek Gröhl; Lina Hacker; Sarah E. Bohndiek (J. Open Source Softw., 2024)

Moving Beyond Simulation: Data-Driven Quantitative Photoacoustic Imaging Using Tissue-Mimicking Phantoms. - Janek Gröhl; Thomas R. Else; Lina Hacker; Ellie V. Bunce; Paul W. Sweeney; Sarah E. Bohndiek (IEEE Trans. Medical Imaging, 2024)

Parameter Choices in Haarpsi for IQA with Medical Images. - Clemens Karner; Janek Gröhl; Ian Selby; Judith Babar; Jake Beckford; Thomas R. Else; Timothy J. Sadler; Shahab Shahipasand; Arthikkaa Thavakumar; Michael Roberts; James H. F. Rudd; Carola-Bibiane Schönlieb; et al. (ISBI, 2025)

Digital twins enable full-reference quality assessment of photoacoustic image reconstructions. - Janek Gröhl; Leonid Kunyansky; Jenni Poimala; Thomas R. Else; Francesca Di Cecio; Sarah E. Bohndiek; Ben T. Cox; Andreas Hauptmann (CoRR, 2025)

PhotIQA: A photoacoustic image data set with image quality ratings. - Anna Breger; Janek Gröhl; Clemens Karner; Thomas R. Else; Ian Selby; Jonathan R. Weir-McCall; Carola-Bibiane Schönlieb (CoRR, 2025)