The Human Anatomic Gene Expression Library (H-ANGEL), the H-Inv integrative display of human gene expression across disparate technologies and platforms. - Motohiko Tanino; Marie-Anne Debily; Takuro Tamura; Teruyoshi Hishiki; Osamu Ogasawara; Katsuji Murakawa; Shoko Kawamoto; Kouichi Itoh; Shinya Watanabe; Sandro José de Souza; Sandrine Imbeaud; Esther Graudens; et al. (Nucleic Acids Res., 2005)

A top-level ontology of functions and its application in the Open Biomedical Ontologies. - Patryk Burek; Robert Hoehndorf; Frank Loebe; Johann Visagie; Heinrich Herre; Janet Kelso (ISMB (Supplement of Bioinformatics), 2006)

A Proposal for a Gene Functions Wiki. - Robert Hoehndorf; Kay Prüfer; Michael Backhaus; Heinrich Herre; Janet Kelso; Frank Loebe; Johann Visagie (OTM Workshops (1), 2006)

BOWiki - a Collaborative Annotation and Ontology Curation Framework. - Michael Backhaus; Janet Kelso; Joshua Bacher; Heinrich Herre; Robert Hoehndorf; Frank Loebe; Johann Visagie (CKC, 2007)

Representing default knowledge in biomedical ontologies: application to the integration of anatomy and phenotype ontologies. - Robert Hoehndorf; Frank Loebe; Janet Kelso; Heinrich Herre (BMC Bioinform., 2007)

BOWiki: Ontology-based Semantic Wiki with ABox Reasoning. - Joshua Bacher; Robert Hoehndorf; Janet Kelso (SemWiki, 2008)

GFO-Bio: A biological core ontology. - Robert Hoehndorf; Frank Loebe; Roberto Poli; Heinrich Herre; Janet Kelso (Appl. Ontology, 2008)

PatMaN: rapid alignment of short sequences to large databases. - Kay Prüfer; Udo Stenzel; Michael Dannemann; Richard E. Green; Michael Lachmann; Janet Kelso (Bioinform., 2008)

DATABASE: A new forum for biological databases and curation. - David Landsman; Robert Gentleman; Janet Kelso; B. F. Francis Ouellette (Database J. Biol. Databases Curation, 2009)

BOWiki: an ontology-based wiki for annotation of data and integration of knowledge in biology. - Robert Hoehndorf; Joshua Bacher; Michael Backhaus; Sergio E. Gregorio Jr.; Frank Loebe; Kay Prüfer; Alexandr Uciteli; Johann Visagie; Heinrich Herre; Janet Kelso (BMC Bioinform., 2009)

The ontology of biological sequences. - Robert Hoehndorf; Janet Kelso; Heinrich Herre (BMC Bioinform., 2009)

Applying the functional abnormality ontology pattern to anatomical functions. - Robert Hoehndorf; Axel-Cyrille Ngonga Ngomo; Janet Kelso (J. Biomed. Semant., 2010)

Relations as patterns: bridging the gap between OBO and OWL. - Robert Hoehndorf; Anika Oellrich; Michel Dumontier; Janet Kelso; Dietrich Rebholz-Schuhmann; Heinrich Herre (BMC Bioinform., 2010)

Towards BioDBcore: a community-defined information specification for biological databases. - Pascale Gaudet; Amos Bairoch; Dawn Field; Susanna-Assunta Sansone; Chris F. Taylor; Teresa K. Attwood; Alex Bateman; Judith A. Blake; Carol J. Bult; J. Michael Cherry; Rex L. Chisholm; Guy Cochrane; et al. (Database J. Biol. Databases Curation, 2011)

OBML - Ontologies in Biomedicine and Life Sciences. - Heinrich Herre; Robert Hoehndorf; Janet Kelso; Frank Loebe; Stefan Schulz 001 (J. Biomed. Semant., 2011)

Towards big data science in the decade ahead from ten years of InCoB and the 1st ISCB-Asia Joint Conference. - Shoba Ranganathan; Christian Schönbach; Janet Kelso; Burkhard Rost; Sheila Nathan; Tin Wee Tan (BMC Bioinform., 2011)

Impact of ontology evolution on functional analyses. - Anika Groß; Michael Hartung; Kay Prüfer; Janet Kelso; Erhard Rahm (Bioinform., 2012)

Paving the future: finding suitable ISMB venues. - Burkhard Rost; Terry Gaasterland; Thomas Lengauer; Michal Linial; Scott Markel; B. J. Morrison McKay; Reinhard Schneider 002; Paul Horton; Janet Kelso (Bioinform., 2012)

freeIbis: an efficient basecaller with calibrated quality scores for Illumina sequencers. - Gabriel Renaud; Martin Kircher; Udo Stenzel; Janet Kelso (Bioinform., 2013)

ISCB Computational Biology Wikipedia Competition. - Alex Bateman; Janet Kelso; Daniel Mietchen; Geoff MacIntyre; Tomás Di Domenico; Thomas Abeel; Darren W. Logan; Predrag Radivojac; Burkhard Rost (PLoS Comput. Biol., 2013)

deML: robust demultiplexing of Illumina sequences using a likelihood-based approach. - Gabriel Renaud; Udo Stenzel; Tomislav Maricic; Victor Wiebe; Janet Kelso (Bioinform., 2015)

ABAEnrichment: an R package to test for gene set expression enrichment in the adult and developing human brain. - Steffi Grote; Kay Prüfer; Janet Kelso; Michael Dannemann (Bioinform., 2016)

admixr - R package for reproducible analyses using ADMIXTOOLS. - Martin Petr; Benjamin Vernot; Janet Kelso (Bioinform., 2019)

Reviewer-coerced citation: case report, update on journal policy and suggestions for future prevention. - Jonathan D. Wren; Alfonso Valencia; Janet Kelso (Bioinform., 2019)

rScudo: an R package for classification of molecular profiles using rank-based signatures. - Matteo Ciciani; Thomas Cantore; Mario Lauria; Janet Kelso (Bioinform., 2020)

SurfaceGenie: a web-based application for prioritizing cell-type-specific marker candidates. - Matthew Waas; Shana T. Snarrenberg; Jack Littrell; Rachel A. Jones Lipinski; Polly A. Hansen; John A. Corbett; Rebekah L. Gundry; Janet Kelso (Bioinform., 2020)

HiGwas: how to compute longitudinal GWAS data in population designs. - Zhong Wang 001; Nating Wang; Zilu Wang; Libo Jiang; Yaqun Wang; Jiahan Li; Rongling Wu; Janet Kelso (Bioinform., 2020)

Characterizing domain-specific open educational resources by linking ISCB Communities of Special Interest to Wikipedia. - Alastair M. Kilpatrick; Farzana Rahman; Audra Anjum; Sayane Shome; K. M. Salim Andalib; Shrabonti Banik; Sanjana F. Chowdhury; Peter Coombe; Yesid Cuesta Astroz; J. Maxwell Douglas; Pradeep Eranti; Aleyna D. Kiran; et al. (Bioinform., 2022)