Assessing the Reliability of Template-Based Clustering for Tractography in Healthy Human Adults. - Jason Kai; Ali R. Khan (Frontiers Neuroinformatics, 2022)

Mapping the subcortical connectome using in vivo diffusion MRI: Feasibility and reliability. - Jason Kai; Ali R. Khan; Roy A. M. Haast; Jonathan C. Lau (NeuroImage, 2022)

Funcmasker-flex: An Automated BIDS-App for Brain Segmentation of Human Fetal Functional MRI data. - Emily S. Nichols; Susana Correa; Peter Van Dyken; Jason Kai; Tristan Kuehn; Sandrine de Ribaupierre; Emma G. Duerden; Ali R. Khan (Neuroinformatics, 2023)

MRI-degad: toward accurate conversion of gadolinium-enhanced T1w MRIs to non-contrast-enhanced scans using CNNs. - Feyi Ogunsanya; Alaa Taha; Greydon Gilmore; Jason Kai; Tristan Kuehn; Arun Thurairajah; Mauricio C. Tenorio; Ali R. Khan; Jonathan C. Lau (Int. J. Comput. Assist. Radiol. Surg., 2024)

nilearn. - Nilearn Contributors; Ahmad Chamma; Aina Frau-Pascual; Alex Rothberg; Alexandre Abadie; Alexandre Abraham; Alexandre Gramfort; Alexandre Savio; Alexandre Cionca; Alexandre Sayal; Alexis Thual; Alisha Kodibagkar; et al. (Zenodo, 2024)

nilearn. - Nilearn Contributors; Ahmad Chamma; Aina Frau-Pascual; Alex Rothberg; Alexandre Abadie; Alexandre Abraham; Alexandre Gramfort; Alexandre Savio; Alexandre Cionca; Alexandre Sayal; Alexis Thual; Alisha Kodibagkar; et al. (Zenodo, 2024)

nilearn. - Nilearn Contributors; Ahmad Chamma; Aina Frau-Pascual; Alex Rothberg; Alexandre Abadie; Alexandre Abraham; Alexandre Gramfort; Alexandre Savio; Alexandre Cionca; Alexandre Sayal; Alexis Thual; Alisha Kodibagkar; et al. (Zenodo, 2025)

nilearn. - Nilearn Contributors; Ahmad Chamma; Aina Frau-Pascual; Alex Rothberg; Alexandre Abadie; Alexandre Abraham; Alexandre Gramfort; Alexandre Savio; Alexandre Cionca; Alexandre Sayal; Alexis Thual; Alisha Kodibagkar; et al. (Zenodo, 2025)