A validated network of effective amygdala connectivity. - Jason L. Stein; Lisa M. Wiedholz; Danielle S. Bassett; Daniel R. Weinberger; Caroline F. Zink; Venkata S. Mattay; Andreas Meyer-Lindenberg (NeuroImage, 2007)

Corrigendum to "A validated network of effective amygdala connectivity" [NeuroImage 36 (2007) 736-745]. - Jason L. Stein; Lisa M. Wiedholz; Danielle S. Bassett; Daniel R. Weinberger; Caroline F. Zink; Venkata S. Mattay; Andreas Meyer-Lindenberg (NeuroImage, 2008)

Voxelwise genome-wide association study (vGWAS). - Jason L. Stein; Xue Hua; Suh Lee; April J. Ho; Alex D. Leow; Arthur W. Toga; Andrew J. Saykin; Li Shen 001; Tatiana Foroud; Nathan Pankratz; Matthew J. Huentelman; David W. Craig; et al. (NeuroImage, 2010)

Genome-wide analysis reveals novel genes influencing temporal lobe structure with relevance to neurodegeneration in Alzheimer's disease. - Jason L. Stein; Xue Hua; Jonathan H. Morra; Suh Lee; Derrek P. Hibar; April J. Ho; Alex D. Leow; Arthur W. Toga; Jae Hoon Sul; Hyun Min Kang; Eleazar Eskin; Andrew J. Saykin; et al. (NeuroImage, 2010)

Principal components regression: Multivariate, gene-based tests in imaging genomics. - Derrek P. Hibar; Jason L. Stein; Omid Kohannim; Neda Jahanshad; Clifford R. Jack; Michael Weiner 001; Arthur W. Toga; Paul M. Thompson (ISBI, 2011)

Boosting power to detect genetic associations in imaging using multi-locus, genome-wide scans and ridge regression. - Omid Kohannim; Derrek P. Hibar; Jason L. Stein; Neda Jahanshad; Clifford R. Jack; Michael Weiner 001; Arthur W. Toga; Paul M. Thompson (ISBI, 2011)

Voxelwise gene-wide association study (vGeneWAS): Multivariate gene-based association testing in 731 elderly subjects. - Derrek P. Hibar; Jason L. Stein; Omid Kohannim; Neda Jahanshad; Andrew J. Saykin; Li Shen 001; Sungeun Kim; Nathan Pankratz; Tatiana Foroud; Matthew J. Huentelman; Steven G. Potkin; Clifford R. Jack Jr.; et al. (NeuroImage, 2011)

Predicting temporal lobe volume on MRI from genotypes using L1-L2 regularized regression. - Omid Kohannim; Derrek P. Hibar; Neda Jahanshad; Jason L. Stein; Xue Hua; Arthur W. Toga; Clifford R. Jack; Michael W. Weiner; Paul M. Thompson (ISBI, 2012)

Structural and functional neuroimaging phenotypes in dysbindin mutant mice. - Evan Lutkenhoff; Katherine H. Karlsgodt; Boris Gutman; Jason L. Stein; Paul M. Thompson; Tyrone D. Cannon; J. David Jentsch (NeuroImage, 2012)

Sparse reduced-rank regression detects genetic associations with voxel-wise longitudinal phenotypes in Alzheimer's disease. - Maria Vounou; Eva Janousová; Robin Wolz; Jason L. Stein; Paul M. Thompson; Daniel Rueckert; Giovanni Montana (NeuroImage, 2012)

Genetic Clustering on the Hippocampal Surface for Genome-Wide Association Studies. - Derrek P. Hibar; Sarah E. Medland; Jason L. Stein; Sungeun Kim; Li Shen 001; Andrew J. Saykin; Greig I. de Zubicaray; Katie McMahon; Grant W. Montgomery; Nicholas G. Martin; Margaret J. Wright; Srdjan Djurovic; et al. (MICCAI (2), 2013)

Exhaustive Search of the SNP-SNP Interactome Identifies Epistatic Effects on Brain Volume in Two Cohorts. - Derrek P. Hibar; Jason L. Stein; Neda Jahanshad; Omid Kohannim; Arthur W. Toga; Katie McMahon; Greig I. de Zubicaray; Grant W. Montgomery; Nicholas G. Martin; Margaret J. Wright; Michael W. Weiner; Paul M. Thompson (MICCAI (3), 2013)

Accurate and High Throughput Cell Segmentation Method for Mouse Brain Nuclei Using Cascaded Convolutional Neural Network. - Qian Wang 001; Shaoyu Wang 001; Xiaofeng Zhu 001; Tianyi Liu; Zachary Humphrey; Vladimir Ghukasyan; Mike Conway; Erik Scott; Giulia Fragola; Kira Bradford; Mark J. Zylka; Ashok K. Krishnamurthy 001; et al. (Patch-MI@MICCAI, 2017)

SAU-Net: A Universal Deep Network for Cell Counting. - Yue Guo 001; Jason L. Stein; Guorong Wu 001; Ashok K. Krishnamurthy 001 (BCB, 2019)

Cross Modality Microscopy Segmentation via Adversarial Adaptation. - Yue Guo 001; Qian Wang 001; Oleh Krupa; Jason L. Stein; Guorong Wu 001; Kira Bradford; Ashok K. Krishnamurthy 001 (IWBBIO (2), 2019)

3D Nucleus Instance Segmentation for Whole-Brain Microscopy Images. - Junbo Ma; Oleh Krupa; Madison Rose Glass; Carolyn M. McCormick; David Borland; Minjeong Kim; Jason L. Stein; Guorong Wu 001 (IPMI, 2021)

Segmentor: a tool for manual refinement of 3D microscopy annotations. - David Borland; Carolyn M. McCormick; Niyanta K. Patel; Oleh Krupa; Jessica T. Mory; Alvaro A. Beltran; Tala M. Farah; Carla F. Escobar-Tomlienovich; Sydney S. Olson; Minjeong Kim; Guorong Wu 001; Jason L. Stein (BMC Bioinform., 2021)

Cell Counting with Inverse Distance Kernel and Self-supervised Learning. - Yue Guo 001; David Borland; Carolyn M. McCormick; Jason L. Stein; Guorong Wu 001; Ashok Kumar Krishnamurthy 001 (MOVI@MICCAI, 2022)

SAU-Net: A Unified Network for Cell Counting in 2D and 3D Microscopy Images. - Yue Guo 001; Oleh Krupa; Jason L. Stein; Guorong Wu 001; Ashok Kumar Krishnamurthy 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2022)

High Throughput Deep Model of 3D Nucleus Instance Segmentation by Stereo Stitching Contextual Gaps. - Ziquan Wei; Tingting Dan; Jiaqi Ding; Carolyn M. McCormick; Felix A. Kyere; Minjeong Kim; David Borland; Jason L. Stein; Guorong Wu 001 (ISBI, 2023)

Genetic variations within human gained enhancer elements affect human brain sulcal morphology. - Hervé Lemaître; Yann Le Guen; Amanda K. Tilot; Jason L. Stein; Cathy Philippe; Jean-François Mangin; Simon E. Fisher; Vincent Frouin (NeuroImage, 2023)