Workshop: Graph compression approaches in assembly. - Jason Pell; Arend Hintze; Rosangela Canino-Koning; Adina Howe; James M. Tiedje; C. Titus Brown (ICCABS, 2012)

Scaling metagenome sequence assembly with probabilistic de Bruijn graphs. - Jason Pell; Arend Hintze; Rosangela Canino-Koning; Adina Howe; James M. Tiedje; C. Titus Brown (Proc. Natl. Acad. Sci. USA, 2012)

The khmer software package: enabling efficient nucleotide sequence analysis. - Michael R. Crusoe; Hussien F. Alameldin; Sherine Awad; Elmar Boucher; Adam Caldwell; Reed Cartwright; Amanda Charbonneau; Bede Constantinides; Greg Edvenson; Scott A. Fay; Jacob Fenton; Thomas Fenzl; et al. (F1000Research, 2015)