The twenty-fourth Fermat number is composite. - Richard E. Crandall; Ernst W. Mayer; Jason S. Papadopoulos (Math. Comput., 2003)

COBALT: constraint-based alignment tool for multiple protein sequences. - Jason S. Papadopoulos; Richa Agarwala (Bioinform., 2007)

Improved BLAST searches using longer words for protein seeding. - Sergey A. Shiryev; Jason S. Papadopoulos; Alejandro A. Schäffer; Richa Agarwala (Bioinform., 2007)

BLAST+: architecture and applications. - Christiam Camacho; George Coulouris; Vahram Avagyan; Ning Ma; Jason S. Papadopoulos; Kevin Bealer; Thomas L. Madden (BMC Bioinform., 2009)