COREX/BEST server: a web browser-based program that calculates regional stability variations within protein structures. - Jason Vertrees; Phillip Barritt; Steve Whitten; Vincent J. Hilser (Bioinform., 2005)

An Introduction to Biomolecular Graphics. - Cameron Mura; Colin M. McCrimmon; Jason Vertrees; Michael R. Sawaya (PLoS Comput. Biol., 2010)

Creating a Real-Time Recommendation Engine using Modified K-Means Clustering and Remote Sensing Signature Matching Algorithms. - David Lippa; Jason Vertrees (SciPy, 2015)