A Framework to Model Human Behavior at Large Scale during Natural Disasters. - Jay Ghurye; Gautier Krings; Vanessa Frías-Martínez (MDM, 2016)

Better Identification of Repeats in Metagenomic Scaffolding. - Jay Ghurye; Mihai Pop (WABI, 2016)

Better Greedy Sequence Clustering with Fast Banded Alignment. - Brian Brubach; Jay Ghurye; Mihai Pop; Aravind Srinivasan (WABI, 2017)

A Succinct Four Russians Speedup for Edit Distance Computation and One-against-many Banded Alignment. - Brian Brubach; Jay Ghurye (CPM, 2018)

Genome assembly and variant Detection using Emerging sequencing Technologies and Graph based Methods. - Jay Ghurye (2018)

Metagenomic assembly through the lens of validation: recent advances in assessing and improving the quality of genomes assembled from metagenomes. - Nathan D. Olson; Todd J. Treangen; Christopher Michael Hill; Victoria Cepeda-Espinoza; Jay Ghurye; Sergey Koren; Mihai Pop (Briefings Bioinform., 2019)

Modern technologies and algorithms for scaffolding assembled genomes. - Jay Ghurye; Mihai Pop (PLoS Comput. Biol., 2019)

Integrating Hi-C links with assembly graphs for chromosome-scale assembly. - Jay Ghurye; Arang Rhie; Brian Walenz; Anthony D. Schmitt; Siddarth Selvaraj; Mihai Pop; Adam M. Phillippy; Sergey Koren (PLoS Comput. Biol., 2019)

A critical assessment of gene catalogs for metagenomic analysis. - Seth Commichaux; Nidhi Shah; Jay Ghurye; Alexander Stoppel; Jessica A. Goodheart; Guillermo G. Luque; Michael P. Cummings; Mihai Pop (Bioinform., 2021)