TPOT2: A New Graph-Based Implementation of the Tree-Based Pipeline Optimization Tool for Automated Machine Learning. - Pedro Henrique Ribeiro; Anil Kumar Saini; Jay Moran; Nicholas Matsumoto; Hyunjun Choi; Miguel E. Hernandez; Jason H. Moore (GPTP, 2023)

Aliro: an automated machine learning tool leveraging large language models. - Hyunjun Choi; Jay Moran; Nicholas Matsumoto; Miguel E. Hernandez; Jason H. Moore (Bioinform., 2023)

Drug repurposing for Alzheimer's disease using a graph-of-thoughts based large language model to infer drug-disease relationships in a comprehensive knowledge graph. - Zhiping Paul Wang; Xi Li; Nicholas Matsumoto; Mythreye Venkatesan; Jui-Hsuan Chang; Jay Moran; Hyunjun Choi; Binglan Li; Yufei Meng; Miguel E. Hernandez; Jason H. Moore (BioData Min., 2025)

AI-driven Automation of End-to-end Assessment of Suturing Expertise. - Atharva Deo; Nicholas Matsumoto; Sun Kim; Peter Wager; Randy G. Tsai; Aaron Denmark; Cherine Yang; Xi Li; Jay Moran; Miguel Hernandez; Andrew J. Hung (CoRR, 2025)