Time series prediction using committee machines of evolutionary neural trees. - Byoung-Tak Zhang; Je-Gun Joung (CEC, 1999)

Building Optimal Committees of Genetic Programs. - Byoung-Tak Zhang; Je-Gun Joung (PPSN, 2000)

Actively searching for committees of RBF networks using Bayesian evolutionary computation. - Je-Gun Joung; Byoung-Tak Zhang (CEC, 2001)

Two-Step Genetic Programming for Optimization of RNA Common-Structure. - Jin-Wu Nam; Je-Gun Joung; Y. S. Ahn; Byoung-Tak Zhang (EvoWorkshops, 2004)

Searching Transcriptional Modules Using Evolutionary Algorithms. - Je-Gun Joung; Sok June Oh; Byoung-Tak Zhang (PPSN, 2004)

Prediction of the Risk Types of Human Papillomaviruses by Support Vector Machines. - Je-Gun Joung; Sok June Oh; Byoung-Tak Zhang (PRICAI, 2004)

Identification of regulatory modules by co-clustering latent variable models: stem cell differentiation. - Je-Gun Joung; Dongho Shin; Rho Hyun Seong; Byoung-Tak Zhang (Bioinform., 2006)

Construction of phylogenetic trees by kernel-based comparative analysis of metabolic networks. - Sok June Oh; Je-Gun Joung; Jeong Ho Chang; Byoung-Tak Zhang (BMC Bioinform., 2006)

Protein sequence-based risk classification for human papillomaviruses. - Je-Gun Joung; Sok June Oh; Byoung-Tak Zhang (Comput. Biol. Medicine, 2006)

Discovery of microRNA-mRNA modules via population-based probabilistic learning. - Je-Gun Joung; Kyu Baek Hwang; Jin-Wu Nam; Soo-Jin Kim; Byoung-Tak Zhang (Bioinform., 2007)

Identification of microRNA regulatory modules in Arabidopsis via a probabilistic graphical model. - Je-Gun Joung; Zhangjun Fei (Bioinform., 2009)

Computational identification of condition-specific miRNA targets based on gene expression profiles and sequence information. - Je-Gun Joung; Zhangjun Fei (BMC Bioinform., 2009)

Comprehensive evaluation of matrix factorization methods for the analysis of DNA microarray gene expression data. - Mi Kim; Hwa Jeong Seo; Je-Gun Joung; Ju Kim (BMC Bioinform., 2011)

Tomato Functional Genomics Database: a comprehensive resource and analysis package for tomato functional genomics. - Zhangjun Fei; Je-Gun Joung; Xuemei Tang; Yi Zheng; Mingyun Huang; Je Min Lee; Ryan McQuinn; Denise M. Tieman; Rob Alba; Harry J. Klee; James J. Giovannoni (Nucleic Acids Res., 2011)

A probabilistic coevolutionary biclustering algorithm for discovering coherent patterns in gene expression dataset. - Je-Gun Joung; Soo-Jin Kim; Soo-Yong Shin; Byoung-Tak Zhang (BMC Bioinform., 2012)

Intra-relation reconstruction from inter-relation: miRNA to gene expression. - Dokyoon Kim; Hyunjung Shin; Je-Gun Joung; Su-Yeon Lee; Ju Han Kim (BMC Syst. Biol., 2013)

Research and applications: Extracting coordinated patterns of DNA methylation and gene expression in ovarian cancer. - Je-Gun Joung; Do Kyoon Kim; Kyung-Hwa Kim; Ju Han Kim (J. Am. Medical Informatics Assoc., 2013)

Knowledge boosting: a graph-based integration approach with multi-omics data and genomic knowledge for cancer clinical outcome prediction. - Dokyoon Kim; Je-Gun Joung; Kyung-Ah Sohn; Hyunjung Shin; Yu Rang Park; Marylyn D. Ritchie; Ju Han Kim (J. Am. Medical Informatics Assoc., 2015)

Evaluation of somatic copy number estimation tools for whole-exome sequencing data. - Jae-Yong Nam; Nayoung K. D. Kim; Sang Cheol Kim; Je-Gun Joung; Ruibin Xi; Semin Lee; Peter J. Park; Woong-Yang Park (Briefings Bioinform., 2016)