miTarget: microRNA target gene prediction using a support vector machine. - Sung-Kyu Kim; Jin-Wu Nam; Je-Keun Rhee; Wha-Jin Lee; Byoung-Tak Zhang (BMC Bioinform., 2006)

AESNB: Active Example Selection with Naive Bayes Classifier for Learning from Imbalanced Biomedical Data. - Min Su Lee; Je-Keun Rhee; Byoung-Hee Kim; Byoung-Tak Zhang (BIBE, 2009)

PEATH: single-individual haplotyping by a probabilistic evolutionary algorithm with toggling. - Joong Chae Na; Jongchan Lee; Je-Keun Rhee; Soo-Yong Shin (Bioinform., 2018)

Identifying DNA Methylation Modules Associated with a Cancer by Probabilistic Evolutionary Learning. - Je-Keun Rhee; Soo-Jin Kim; Byoung-Tak Zhang (IEEE Comput. Intell. Mag., 2018)

Fast single individual haplotyping method using GPGPU. - Joong Chae Na; Inbok Lee; Je-Keun Rhee; Soo-Yong Shin (Comput. Biol. Medicine, 2019)

Identification of Local Clusters of Mutation Hotspots in Cancer-Related Genes and Their Biological Relevance. - Je-Keun Rhee; Jinseon Yoo; Kyu Ryung Kim; Jeeyoon Kim; Yong-Jae Lee; Byoung Chul Cho; Tae-Min Kim (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)

Cell Subtype Classification via Representation Learning Based on a Denoising Autoencoder for Single-Cell RNA Sequencing. - Joungmin Choi; Je-Keun Rhee; Heejoon Chae (IEEE Access, 2021)

Prediction of tumor purity from gene expression data using machine learning. - Bonil Koo; Je-Keun Rhee (Briefings Bioinform., 2021)

Robust auxiliary learning with weighting function for biased data. - Dasol Hwang; Sojin Lee; Joonmyung Choi; Je-Keun Rhee; Hyunwoo J. Kim (Inf. Sci., 2023)