Model-Based Segmentation of Hippocampal Subfields in Ultra-High Resolution In Vivo MRI. - Koen Van Leemput; Akram Bakkour; Thomas Benner; Graham C. Wiggins; Lawrence L. Wald; Jean Augustinack; Bradford C. Dickerson; Polina Golland; Bruce Fischl (MICCAI (1), 2008)

Accurate prediction of V1 location from cortical folds in a surface coordinate system. - Oliver Hinds; Niranjini Rajendran; Jonathan R. Polimeni; Jean C. Augustinack; Graham C. Wiggins; Lawrence L. Wald; H. Diana Rosas; Andreas Potthast; Eric L. Schwartz; Bruce Fischl (NeuroImage, 2008)

Anatomical Priors for Global Probabilistic Diffusion Tractography. - Anastasia Yendiki; Allison Stevens; Jean Augustinack; David H. Salat; Lilla Zöllei; Bruce Fischl (ISBI, 2009)

Predicting the location of entorhinal cortex from MRI. - Bruce Fischl; Allison Stevens; Niranjini Rajendran; B. T. Thomas Yeo; Douglas N. Greve; Koen Van Leemput; Jonathan R. Polimeni; Sita Kakunoori; Randy L. Buckner; Jennifer L. Pacheco; David H. Salat; Jennifer Melcher; et al. (NeuroImage, 2009)

Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age. - Satrajit S. Ghosh; Sita Kakunoori; Jean Augustinack; Alfonso Nieto-Castañón; Ioulia Kovelman; Nadine Gaab; Joanna A. Christodoulou; Christina Triantafyllou; John D. E. Gabrieli; Bruce Fischl (NeuroImage, 2010)

Automated Probabilistic Reconstruction of White-Matter Pathways in Health and Disease Using an Atlas of the Underlying Anatomy. - Anastasia Yendiki; Patricia Panneck; Priti Srinivasan; Allison Stevens; Lilla Zöllei; Jean Augustinack; Ruopeng Wang; David H. Salat; Stefan Ehrlich; Tim E. J. Behrens; Saâd Jbabdi; Randy L. Gollub; et al. (Frontiers Neuroinformatics, 2011)

Connectivity-based segmentation of human amygdala nuclei using probabilistic tractography. - Zeynep M. Saygin; David E. Osher; Jean Augustinack; Bruce Fischl; John D. E. Gabrieli (NeuroImage, 2011)

Predicting the location of human perirhinal cortex, Brodmann's area 35, from MRI. - Jean Augustinack; Kristen Huber; Allison Stevens; Michelle Roy; Matthew P. Frosch; André J. W. van der Kouwe; Lawrence L. Wald; Koen Van Leemput; Ann C. McKee; Bruce Fischl (NeuroImage, 2013)

Surface based analysis of diffusion orientation for identifying architectonic domains in the in vivo human cortex. - Jennifer A. McNab; Jonathan R. Polimeni; Ruopeng Wang; Jean Augustinack; Kyoko Fujimoto; Allison Stevens; Thomas Janssens; Reza Farivar 001; Rebecca D. Folkerth; Wim Vanduffel; Lawrence L. Wald (NeuroImage, 2013)

Corrigendum to "Surface based analysis of diffusion orientation for identifying architectonic domains in the in vivo human cortex" [NeuroImage 69 (2013) 87-100]. - Jennifer A. McNab; Jonathan R. Polimeni; Ruopeng Wang; Jean Augustinack; Kyoko Fujimoto; Allison Stevens; Christina Triantafyllou; Thomas Janssens; Reza Farivar 001; Rebecca D. Folkerth; Wim Vanduffel; Lawrence L. Wald (NeuroImage, 2013)

MRI parcellation of ex vivo medial temporal lobe. - Jean C. Augustinack; Caroline Magnain; Martin Reuter 001; André J. W. van der Kouwe; David A. Boas; Bruce Fischl (NeuroImage, 2014)

Blockface histology with optical coherence tomography: A comparison with Nissl staining. - Caroline Magnain; Jean Augustinack; Martin Reuter 001; Christian Wachinger; Matthew P. Frosch; Timothy Ragan; Taner Akkin; Van J. Wedeen; David A. Boas; Bruce Fischl (NeuroImage, 2014)

A computational atlas of the hippocampal formation using ex vivo, ultra-high resolution MRI: Application to adaptive segmentation of in vivo MRI. - Juan Eugenio Iglesias; Jean C. Augustinack; Khoa Nguyen; Christopher M. Player; Allison Player; Michelle Wright; Nicole Roy; Matthew P. Frosch; Ann C. McKee; Lawrence L. Wald; Bruce Fischl; Koen Van Leemput (NeuroImage, 2015)

Quantitative comparison of 21 protocols for labeling hippocampal subfields and parahippocampal subregions in in vivo MRI: Towards a harmonized segmentation protocol. - Paul A. Yushkevich; Robert S. C. Amaral; Jean C. Augustinack; Andrew R. Bender; Jeffrey D. Bernstein; Marina Boccardi; Martina Bocchetta; Alison C. Burggren; Valerie A. Carr; M. Mallar Chakravarty; Gaël Chételat; Ana M. Daugherty; et al. (NeuroImage, 2015)

Rapid multi-orientation quantitative susceptibility mapping. - Berkin Bilgic; Luke Xie; Russell Dibb; Christian Langkammer; Aysegul Mutluay; Huihui Ye; Jonathan R. Polimeni; Jean Augustinack; Chunlei Liu 004; Lawrence L. Wald; Kawin Setsompop (NeuroImage, 2016)

Bayesian longitudinal segmentation of hippocampal substructures in brain MRI using subject-specific atlases. - Juan Eugenio Iglesias; Koen Van Leemput; Jean Augustinack; Ricardo Insausti; Bruce Fischl; Martin Reuter 001 (NeuroImage, 2016)

High-resolution magnetic resonance imaging reveals nuclei of the human amygdala: manual segmentation to automatic atlas. - Zeynep M. Saygin; Dorit Kliemann; Juan Eugenio Iglesias; André J. W. van der Kouwe; Ellen Boyd; Martin Reuter 001; Allison Stevens; Koenraad Van Leemput; Alexis McKee; Matthew P. Frosch; Bruce Fischl; Jean C. Augustinack (NeuroImage, 2017)

as-PSOCT: Volumetric microscopic imaging of human brain architecture and connectivity. - Hui Wang 060; Caroline Magnain; Ruopeng Wang; Jay Dubb; Ani Varjabedian; Lee S. Tirrell; Allison Stevens; Jean C. Augustinack; Ender Konukoglu; Iman Aganj; Matthew P. Frosch; Jeremy D. Schmahmann; et al. (NeuroImage, 2018)

Detecting Structural Brain Connectivity Differences in Dementia Through a Conductance Model. - Aina Frau-Pascual; Jean Augustinack; Divya Varadarajan; Anastasia Yendiki; Bruce Fischl; Iman Aganj (ACSSC, 2019)

Compensatory Brain Connection Discovery in Alzheimer's Disease. - Iman Aganj; Aina Frau-Pascual; Juan Eugenio Iglesias; Anastasia Yendiki; Jean C. Augustinack; David H. Salat; Bruce Fischl (ISBI, 2020)

Insight into the fundamental trade-offs of diffusion MRI from polarization-sensitive optical coherence tomography in ex vivo human brain. - Robert Jones; Giorgia Grisot; Jean Augustinack; Caroline Magnain; David A. Boas; Bruce Fischl; Hui Wang 060; Anastasia Yendiki (NeuroImage, 2020)

Conductance-Based Structural Brain Connectivity in Aging and Dementia. - Aina Frau-Pascual; Jean Augustinack; Divya Varadarajan; Anastasia Yendiki; David H. Salat; Bruce Fischl; Iman Aganj (Brain Connect., 2021)

A deep learning toolbox for automatic segmentation of subcortical limbic structures from MRI images. - Douglas N. Greve; Benjamin Billot; Devani Cordero; Andrew Hoopes; Malte Hoffmann; Adrian V. Dalca; Bruce Fischl; Juan Eugenio Iglesias; Jean C. Augustinack (NeuroImage, 2021)

Connectome 2.0: Developing the next-generation ultra-high gradient strength human MRI scanner for bridging studies of the micro-, meso- and macro-connectome. - Susie Yi Huang; Thomas Witzel; Boris Keil; Alina Scholz; Mathias Davids; Peter Dietz; Elmar Rummert; Rebecca Ramb; John E. Kirsch; Anastasia Yendiki; Qiuyun Fan; Qiyuan Tian; et al. (NeuroImage, 2021)

High-fidelity approximation of grid- and shell-based sampling schemes from undersampled DSI using compressed sensing: Post mortem validation. - Robert Jones; Chiara Maffei; Jean Augustinack; Bruce Fischl; Hui Wang 060; Berkin Bilgic; Anastasia Yendiki (NeuroImage, 2021)

A Constrast-Agnostic Method for Ultra-High Resolution Claustrum Segmentation. - Chiara Mauri; Ryan Fritz; Jocelyn Mora; Benjamin Billot; Juan Eugenio Iglesias; Koen Van Leemput; Jean Augustinack; Douglas N. Greve (CoRR, 2024)