Stochastic simulation of enzymatic reactions under transcriptional feedback regulation. - Jean-Baptiste Lugagne; Diego A. Oyarzún; Guy-Bart Stan (ECC, 2013)

Contrôle temps-réel d'une bascule génétique. (Real-time control of a genetic toggle switch). - Jean-Baptiste Lugagne (2016)

DeLTA: Automated cell segmentation, tracking, and lineage reconstruction using deep learning. - Jean-Baptiste Lugagne; Haonan Lin; Mary J. Dunlop (PLoS Comput. Biol., 2020)

DeLTA 2.0: A deep learning pipeline for quantifying single-cell spatial and temporal dynamics. - Owen M. O'Connor; Razan N. Alnahhas; Jean-Baptiste Lugagne; Mary J. Dunlop (PLoS Comput. Biol., 2022)