Regression analysis for comparing protein samples with 16O/18O stable-isotope labeled mass spectrometry. - Jeanette E. Eckel-Passow; Ann L. Oberg; Terry M. Therneau; C. J. Mason; Douglas W. Mahoney; K. L. Johnson; J. E. Olson; H. R. Bergen III (Bioinform., 2006)

Software comparison for evaluating genomic copy number variation for Affymetrix 6.0 SNP array platform. - Jeanette E. Eckel-Passow; Elizabeth J. Atkinson; Sooraj Maharjan; Sharon L. R. Kardia; Mariza de Andrade (BMC Bioinform., 2011)

A new statistic for identifying batch effects in high-throughput genomic data that uses guided principal component analysis. - Sarah E. Reese; Kellie J. Archer; Terry M. Therneau; Elizabeth J. Atkinson; Celine M. Vachon; Mariza de Andrade; Jean-Pierre A. Kocher; Jeanette E. Eckel-Passow (Bioinform., 2013)

Measure transcript integrity using RNA-seq data. - Liguo Wang 002; Jinfu J. Nie; Hugues Sicotte; Ying Li; Jeanette E. Eckel-Passow; Surendra Dasari; Peter T. Vedell; Poulami Barman; Liewei Wang; Richard Weinshiboum; Jin Jen; Haojie Huang; et al. (BMC Bioinform., 2016)

CpGtools: a python package for DNA methylation analysis. - Ting Wei; Jinfu J. Nie; Nicholas B. Larson; Zhenqing Ye; Jeanette E. Eckel-Passow; Keith D. Robertson; Jean-Pierre A. Kocher; Liguo Wang 002 (Bioinform., 2021)