Extending assembly of short DNA sequences to handle error. - William R. Jeck; Josephine A. Reinhardt; David A. Baltrus; Matthew T. Hickenbotham; Vincent J. Magrini; Elaine R. Mardis; Jeffery L. Dangl; Corbin D. Jones (Bioinform., 2007)

MT-Toolbox: improved amplicon sequencing using molecule tags. - Scott M. Yourstone; Derek S. Lundberg; Jeffery L. Dangl; Corbin D. Jones (BMC Bioinform., 2014)

Learning Microbial Interaction Networks from Metagenomic Count Data. - Surojit Biswas; Meredith McDonald; Derek S. Lundberg; Jeffery L. Dangl; Vladimir Jojic (J. Comput. Biol., 2016)