A Recommendation Algorithm for Automating Corollary Order Generation. - Jeffrey G. Klann; Gunther Schadow; J. Michael McCoy (AMIA, 2009)

An intelligent listening framework for capturing encounter notes from a doctor-patient dialog. - Jeffrey G. Klann; Peter Szolovits (BMC Medical Informatics Decis. Mak., 2009)

Modeling the information-value decay of medical problems for problem list maintenance. - Jeffrey G. Klann; Gunther Schadow (IHI, 2010)

Query Health and i2b2: Enabling Standards-based, Multiplatform Population Health Queries. - Jeffrey G. Klann; Shawn N. Murphy (AMIA, 2012)

The Medical App Store, Research Data Repositories, and Physician Cognitive Overload: Uniting Three Large, Multisite Grants for Health Care Transformation. - Jeffrey G. Klann; Adam Wright; Allison B. McCoy; Shawn N. Murphy (AMIA, 2012)

Query Health Across Communities: The New York City Department of Health and Mental Hygiene Pilot. - Jeffrey G. Klann; Michael D. Buck (AMIA, 2013)

Query Health: One Step Toward a Learning Health System. - Jeffrey G. Klann; Michael D. Buck; Jeffrey S. Brown; Shawn N. Murphy; Douglas B. Fridsma (AMIA, 2013)

Using SMART and i2b2 to Efficiently Identify Adverse Events. - Jeffrey G. Klann; Rachel L. Ramoni; Shawn N. Murphy (AMIA, 2013)

Enabling Patient-Centric Comparative Effectiveness Research in i2b2. - Jeffrey G. Klann; Lori C. Phillips; Kenneth D. Mandl; Shawn N. Murphy (AMIA, 2014)

Query Health: standards-based, cross-platform population health surveillance. - Jeffrey G. Klann; Michael D. Buck; Jeffrey S. Brown; Marc Hadley; Richard Elmore; Griffin M. Weber; Shawn N. Murphy (J. Am. Medical Informatics Assoc., 2014)

Brief communication: Scalable Collaborative Infrastructure for a Learning Healthcare System (SCILHS): Architecture. - Kenneth D. Mandl; Isaac S. Kohane; Douglas McFadden; Griffin M. Weber; Marc D. Natter; Joshua C. Mandel; Sebastian Schneeweiss; Sarah Weiler; Jeffrey G. Klann; Jonathan P. Bickel; William G. Adams; Yaorong Ge; et al. (J. Am. Medical Informatics Assoc., 2014)

Decision support from local data: Creating adaptive order menus from past clinician behavior. - Jeffrey G. Klann; Peter Szolovits; Stephen M. Downs; Gunther Schadow (J. Biomed. Informatics, 2014)

The Scalable Collaborative Infrastructure for a Learning Health System. - Jeffrey G. Klann; Marc D. Natter; Douglas MacFadden; Sarah Weiler; Kenneth D. Mandl; Shawn N. Murphy (AMIA, 2015)

The Scalable Collaborative Infrastructure for a Learning Health System: Facilitating Agile Comparative Effectiveness Research. - Jeffrey G. Klann; Marc D. Natter; Douglas MacFadden; Sarah Weiler; Kenneth D. Mandl; Shawn N. Murphy (AMIA, 2015)

Supporting Multi-sourced Medication Information in i2b2. - Jeffrey G. Klann; Pascal B. Pfiffner; Marc D. Natter; Emily Conner; Paul Blazejewski; Shawn N. Murphy; Kenneth D. Mandl (AMIA, 2015)

SCILHS Data Mart Creation Plugin. - Michael Mendis; Janice Donahoe; Jeffrey G. Klann; Vijay A. Raghavan; Lori C. Phillips; Alexander Turchin; Shawn N. Murphy (AMIA, 2015)

Taking advantage of continuity of care documents to populate a research repository. - Jeffrey G. Klann; Michael Mendis; Lori C. Phillips; Alyssa P. Goodson; Beatriz H. Rocha; Howard S. Goldberg; Nich Wattanasin; Shawn N. Murphy (J. Am. Medical Informatics Assoc., 2015)

A numerical similarity approach for using retired Current Procedural Terminology (CPT) codes for electronic phenotyping in the Scalable Collaborative Infrastructure for a Learning Health System (SCILHS). - Jeffrey G. Klann; Lori C. Phillips; Alexander Turchin; Sarah Weiler; Kenneth D. Mandl; Shawn N. Murphy (BMC Medical Informatics Decis. Mak., 2015)

Comparison of Data Models used in Research Data Repositories for Electronic Phenotyping. - Jeffrey G. Klann; Vijay A. Raghavan; Michael Mendis; Douglas MacFadden; Sarah R. Weiler; Kenneth D. Mandl; Shawn N. Murphy (AMIA, 2016)

Data Topography of a Large Multi-Site Research Network. - Jeffrey G. Klann; Vijay A. Raghavan; Douglas MacFadden; Sarah R. Weiler; Kenneth D. Mandl; Shawn N. Murphy (AMIA, 2016)

Cajun Codefest 4.0 on SMART-on-FHIR apps for Diabetes. - Kavishwar B. Wagholikar; Rahul Jain; Eliel Oliveira; Henry Chu; Harshal Shah; Joshua C. Mandel; Jeffrey G. Klann; Sohail Rao; Kenneth D. Mandl; Shawn N. Murphy; Thomas Carton (AMIA, 2016)

Evaluation of SMART-on-FHIR I2b2 cell using PCORNET data model. - Kavishwar B. Wagholikar; Rahul Jain; Eliel Oliveira; Joshua C. Mandel; Jeffrey G. Klann; Prasad Patil; Kenneth D. Mandl; Shawn N. Murphy; Thomas Carton (AMIA, 2016)

Comparison of Two Distributed Data Network Approaches: Democratic and Self-Governed vs. Centrally Managed. - Jeffrey G. Klann; Vijay A. Raghavan; Douglas MacFadden; Sarah Weiler; Kenneth D. Mandl; Shawn N. Murphy (CRI, 2016)

Multi-site Data Completeness Analysis: Application to Laboratory Results in a Large Distributed Research Network. - Jeffrey G. Klann; Vijay A. Raghavan; Douglas MacFadden; Sarah Weiler; Kenneth D. Mandl; Shawn N. Murphy (CRI, 2016)

Read only SMART on FHIR Façade for I2b2. - Kavishwar B. Wagholikar; Joshua C. Mandel; Jeffrey G. Klann; Nich Wattanasin; Michael Mendis; Christopher G. Chute; Kenneth D. Mandl; Shawn N. Murphy (CRI, 2016)

Data interchange using i2b2. - Jeffrey G. Klann; Aaron Abend; Vijay A. Raghavan; Kenneth D. Mandl; Shawn N. Murphy (J. Am. Medical Informatics Assoc., 2016)

Applying unsupervised learning to characterize rare observations in clinical data: the DQe-p tool. - Hossein Estiri; Jeffrey G. Klann; Kavishwar B. Wagholikar; Shawn N. Murphy (AMIA, 2017)

Reuse of PCORnet Data to Support the Precision Medicine Initiative: Data Model Harmonization. - Jeffrey G. Klann; Matthew A. Joss; Kevin Embree; Shawn N. Murphy (AMIA, 2017)

Web-Service-Enabled Apps for Research: SMART-on-FHIR for OMOP and PCORNet. - Jeffrey G. Klann; Kavishwar B. Wagholikar; Lori C. Phillips; Matthew A. Joss; Shawn N. Murphy (AMIA, 2017)

Data Fitness-for-Use: A Method to Maximize Utility of Poor-Quality Data? - Jeffrey G. Klann; Daniella Meeker; Marc B. Rosenman; Shawn N. Murphy (CRI, 2017)

Needs-Driven Data Completeness Dashboard in a Multi-Site Research Network. - Jeffrey G. Klann; Vijay A. Raghavan; Sarah Weiler; Kenneth D. Mandl; Shawn N. Murphy (CRI, 2017)

Needs-Driven Data Completeness Assessment for Clinical Research. - Jeffrey G. Klann; Vijay A. Raghavan; Chunhua Weng; Sarah Weiler; Kenneth D. Mandl; Shawn N. Murphy (CRI, 2017)

Evolving Research Data Sharing Networks to Clinical App Sharing Networks. - Kavishwar B. Wagholikar; Rahul Jain; Eliel Oliveira; Joshua C. Mandel; Jeffrey G. Klann; Ricardo Colas; Prasad Patil; Kuladip Yadav; Kenneth D. Mandl; Shawn N. Murphy (CRI, 2017)

The Building Blocks of Inter-operability. - Adam Culbertson; Satyender Goel; Margaret B. Madden; Niloufar Safaeinili; Kathryn L. Jackson; Thomas Carton; Russ Waitman; Mei Liu; Ashok Krishnamurthy; Lauren Hall; Nickie Cappella; Shyam Visweswaran; et al. (Appl. Clin. Inform., 2017)

SMART-on-FHIR implemented over i2b2. - Kavishwar B. Wagholikar; Joshua C. Mandel; Jeffrey G. Klann; Nich Wattanasin; Michael Mendis; Christopher G. Chute; Kenneth D. Mandl; Shawn N. Murphy (J. Am. Medical Informatics Assoc., 2017)

Harmonizing Flowsheet Datasets Across EHRs for a Multi-Site Study. - Brittany Couture; Jeffrey G. Klann; Kenrick Cato; Christopher Knaplund; Min-Jeoung Kang; Patricia C. Dykes; Sarah A. Collins (AMIA, 2018)

Accessible Research Commons for Health: Four Years Into the PCORnet Journey. - Jeffrey G. Klann; Stanley Boykin; Marc D. Natter; Margaret Vella; Douglas MacFadden; Sarah R. Weiler; Sebastian Schneeweiss; Kenneth D. Mandl; Shawn N. Murphy (AMIA, 2018)

Exploring completeness in clinical data research networks with DQe-c. - Hossein Estiri; Kari A. Stephens; Jeffrey G. Klann; Shawn N. Murphy (J. Am. Medical Informatics Assoc., 2018)

Web services for data warehouses: OMOP and PCORnet on i2b2. - Jeffrey G. Klann; Lori C. Phillips; Christopher Herrick; Matthew A. Joss; Kavishwar B. Wagholikar; Shawn N. Murphy (J. Am. Medical Informatics Assoc., 2018)

Ontologies Enabling Computable Tables. - Jeffrey G. Klann; Nich Wattanasin; Michael Mendis; Matthew A. Joss; Hossein Estiri; Kavishwar B. Wagholikar; Shawn N. Murphy (AMIA, 2019)

Leveraging Clinical Expertise as a Feature - not an Outcome - of Predictive Models: Evaluation of an Early Warning System Use Case. - Sarah Collins Rossetti; Christopher Knaplund; David J. Albers; Abdul A. Tariq; Kui Tang; David K. Vawdrey; Natalie Yip; Patricia C. Dykes; Jeffrey G. Klann; Min-Jeoung Kang; Jose P. Garcia; Li-heng Fu; et al. (AMIA, 2019)

A federated EHR network data completeness tracking system. - Hossein Estiri; Jeffrey G. Klann; Sarah R. Weiler; Ernest Alema-Mensah; R. Joseph Applegate; Galina Lozinski; Nandan Patibandla; Kun Wei; William G. Adams; Marc D. Natter; Elizabeth O. Ofili; Brian Ostasiewski; et al. (J. Am. Medical Informatics Assoc., 2019)

Facilitating phenotype transfer using a common data model. - George Hripcsak; Ning Shang; Peggy L. Peissig; Luke V. Rasmussen; Cong Liu 020; Barbara Benoit; Robert J. Carroll; David S. Carrell; Joshua C. Denny; Ozan Dikilitas; Vivian S. Gainer; Kayla Marie Howell; et al. (J. Biomed. Informatics, 2019)

A clustering approach for detecting implausible observation values in electronic health records data. - Hossein Estiri; Jeffrey G. Klann; Shawn N. Murphy (BMC Medical Informatics Decis. Mak., 2019)

Generative Transfer Learning for Measuring Plausibility of EHR Diagnosis Records Over Time. - Hossein Estiri; Sebastien Vasey; Jeffrey G. Klann; Victor M. Castro; Shawn N. Murphy (AMIA, 2020)

Informatics for Integrating Biology and the Bedside (i2b2) in 2020: Supporting Large Ontologies and REDcap Surveys. - Jeffrey G. Klann; Michael Mendis; Diane Keogh; Shawn N. Murphy (AMIA, 2020)

SCOR: A secure international informatics infrastructure to investigate COVID-19. - Jean Louis Raisaro; Francesco Marino; Juan Ramón Troncoso-Pastoriza; Raphaelle Beau-Lejdstrom; Riccardo Bellazzi; Robert Murphy; Elmer V. Bernstam; Henry Wang; Mauro Bucalo; Yong Chen 016; Assaf Gottlieb; Arif Ozgun Harmanci; et al. (J. Am. Medical Informatics Assoc., 2020)

International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium. - Gabriel A. Brat; Griffin M. Weber; Nils Gehlenborg; Paul Avillach; Nathan P. Palmer; Luca Chiovato; James J. Cimino; Lemuel R. Waitman; Gilbert S. Omenn; Alberto Malovini; Jason H. Moore; Brett K. Beaulieu-Jones; et al. (npj Digit. Medicine, 2020)

Transitive Sequencing Medical Records for Mining Predictive and Interpretable Temporal Representations. - Hossein Estiri; Zachary H. Strasser; Jeffrey G. Klann; Thomas H. McCoy Jr.; Kavishwar B. Wagholikar; Sebastien Vasey; Victor M. Castro; Marykate Murphy; Shawn N. Murphy (Patterns, 2020)

Integrating Informatics for Integrating Biology and the Bedside with tranSMART: Flexible Data Warehousing with Complex Analytics. - Jeffrey G. Klann; Michael Mendis; Peter Rice; Rudy Potenzone; Louisa May Klann; Griffin M. Weber; Diane Keogh; Shawn N. Murphy (AMIA, 2021)

Combining Chart Review and Hospital System Dynamics for Electronic Health Record Phenotyping in an International COVID-19 Research Network. - Jeffrey G. Klann; Griffin M. Weber; Emma Perez; William Yuan; Gabriel A. Brat; Shawn N. Murphy (AMIA, 2021)

Identifying nursing documentation patterns associated with patient deterioration and recovery from deterioration in critical and acute care settings. - Kumiko O. Schnock; Min-Jeoung Kang; Sarah Collins Rossetti; Jose P. Garcia; Graham Lowenthal; Chris Knaplund; Frank Y. Chang; David J. Albers; Zfania Tom Korach; Li Zhou 007; Jeffrey G. Klann; Kenrick Cato; et al. (Int. J. Medical Informatics, 2021)

The National COVID Cohort Collaborative (N3C): Rationale, design, infrastructure, and deployment. - Melissa A. Haendel; Christopher G. Chute; Tellen D. Bennett; David A. Eichmann; Justin Guinney; Warren A. Kibbe; Philip R. O. Payne; Emily R. Pfaff; Peter N. Robinson; Joel H. Saltz; Heidi Spratt; Christine Suver; et al. (J. Am. Medical Informatics Assoc., 2021)

Validation of an internationally derived patient severity phenotype to support COVID-19 analytics from electronic health record data. - Jeffrey G. Klann; Hossein Estiri; Griffin M. Weber; Bertrand Moal; Paul Avillach; Chuan Hong; Amelia L. M. Tan; Brett K. Beaulieu-Jones; Victor M. Castro; Thomas Maulhardt; Alon Geva; Alberto Malovini; et al. (J. Am. Medical Informatics Assoc., 2021)

Healthcare Process Modeling to Phenotype Clinician Behaviors for Exploiting the Signal Gain of Clinical Expertise (HPM-ExpertSignals): Development and evaluation of a conceptual framework. - Sarah Collins Rossetti; Chris Knaplund; David J. Albers; Patricia C. Dykes; Min-Jeoung Kang; Zfania Tom Korach; Li Zhou 007; Kumiko Schnock; Jose P. Garcia; Jessica M. Schwartz; Li-heng Fu; Jeffrey G. Klann; et al. (J. Am. Medical Informatics Assoc., 2021)

Predicting COVID-19 mortality with electronic medical records. - Hossein Estiri; Zachary H. Strasser; Jeffrey G. Klann; Pourandokht Naseri; Kavishwar B. Wagholikar; Shawn N. Murphy (npj Digit. Medicine, 2021)

Informatics for Integrating Biology and the Bedside (i2b2) in 2022: Single Sign On and Synthetic Data. - Jeffrey G. Klann; Michael Mendis; Kevin Bui; Griffin M. Weber; Diane Keogh; Shawn N. Murphy (AMIA, 2022)

Distinguishing Admissions Specifically for COVID-19 from Incidental SARS-CoV-2 Admissions. - Jeffrey G. Klann; Zachary H. Strasser; Chris J. Kennedy; Meghan Hutch; John H. Holmes; Gabriel A. Brat; Shawn N. Murphy (AMIA, 2022)

i2b2 Modern UI to Achieve Unified i2b2/SHRINE User Experience. - Anupama Maram; Nick Benik; Griffin M. Weber; Jeffrey G. Klann (AMIA, 2022)

An objective framework for evaluating unrecognized bias in medical AI models predicting COVID-19 outcomes. - Hossein Estiri; Zachary H. Strasser; Sina Rashidian; Jeffrey G. Klann; Kavishwar B. Wagholikar; Thomas H. McCoy Jr.; Shawn N. Murphy (J. Am. Medical Informatics Assoc., 2022)

SurvMaximin: Robust federated approach to transporting survival risk prediction models. - Xuan Wang; Harrison G. Zhang; Xin Xiong; Chuan Hong; Griffin M. Weber; Gabriel A. Brat; Clara-Lea Bonzel; Yuan Luo 001; Rui Duan 004; Nathan P. Palmer; Meghan R. Hutch; Alba Gutiérrez-Sacristán; et al. (J. Biomed. Informatics, 2022)

International electronic health record-derived post-acute sequelae profiles of COVID-19 patients. - Harrison G. Zhang; Arianna Dagliati; Zahra Shakeri Hossein Abad; Xin Xiong; Clara-Lea Bonzel; Zongqi Xia; Bryce W. Q. Tan; Paul Avillach; Gabriel A. Brat; Chuan Hong; Michele Morris; Shyam Visweswaran; et al. (npj Digit. Medicine, 2022)

I2b2-etl: Python application for importing electronic health data into the informatics for integrating biology and the bedside platform. - Kavishwar B. Wagholikar; Layne Ainsworth; David Zelle; Kira Chaney; Michael Mendis; Jeffrey G. Klann; Alexander J. Blood; Angela Miller; Rupendra Chulyadyo; Michael Oates; William J. Gordon; Samuel J. Aronson; et al. (Bioinform., 2022)

A broadly applicable approach to enrich electronic-health-record cohorts by identifying patients with complete data: a multisite evaluation. - Jeffrey G. Klann; Darren W. Henderson; Michele Morris; Hossein Estiri; Griffin M. Weber; Shyam Visweswaran; Shawn N. Murphy (J. Am. Medical Informatics Assoc., 2023)