Flat-panel cone-beam CT: a novel imaging technology for image-guided procedures. - Jeffrey H. Siewerdsen; David A. Jaffray; Gregory K. Edmundson; W. P. Sanders; John W. Wong; Alvaro A. Martinez (Image-Guided Procedures, 2001)

Cone-beam CT with a flat-panel detector on a mobile C-arm: preclinical investigation in image-guided surgery of the head and neck. - Jeffrey H. Siewerdsen; Y. Chan; M. A. Rafferty; D. J. Moseley; David A. Jaffray; Jonathan C. Irish (Image-Guided Procedures, 2005)

High-performance intraoperative cone-beam CT on a mobile C-arm: an integrated system for guidance of head and neck surgery. - Jeffrey H. Siewerdsen; Michael J. Daly; Harley Chan; Sajendra Nithiananthan; N. Hamming; Kristy K. Brock; Jonathan C. Irish (Image-Guided Procedures, 2009)

C-arm cone beam CT guidance of sinus and skull base surgery: quantitative surgical performance evaluation and development of a novel high-fidelity phantom. - Allan Vescan; Harley Chan; Michael J. Daly; I. Witterick; Jonathan C. Irish; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2009)

A new method of morphological comparison for bony reconstructive surgery: maxillary reconstruction using scapular tip bone. - Harley Chan; Ralph W. Gilbert; Nitin A. Pagedar; Michael J. Daly; Jonathan C. Irish; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2010)

Fusion of intraoperative cone-beam CT and endoscopic video for image-guided procedures. - Michael J. Daly; Harley Chan; E. Prisman; Allan Vescan; Sajendra Nithiananthan; J. Qiu; R. Weersink; Jonathan C. Irish; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2010)

Demons deformable registration for cone-beam CT guidance: registration of pre- and intra-operative images. - Sajendra Nithiananthan; Kristy K. Brock; Michael J. Daly; Harley Chan; Jonathan C. Irish; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2010)

Clinical implementation of intraoperative cone-beam CT in head and neck surgery. - Michael J. Daly; Harley Chan; Sajendra Nithiananthan; J. Qiu; E. Barker; G. Bachar; B. J. Dixon; Jonathan C. Irish; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2011)

High-accuracy 3D image-based registration of endoscopic video to C-arm cone-beam CT for image-guided skull base surgery. - Daniel J. Mirota; Ali Uneri; Sebastian Schafer; Sajendra Nithiananthan; Douglas D. Reh; Gary L. Gallia; Russell H. Taylor; Gregory D. Hager; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2011)

Incorporating tissue excision in deformable image registration: a modified demons algorithm for cone-beam CT-guided surgery. - Sajendra Nithiananthan; Daniel Mirota; Ali Uneri; Sebastian Schafer; Yoshito Otake; J. Webster Stayman; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2011)

Architecture of a high-performance surgical guidance system based on C-arm cone-beam CT: software platform for technical integration and clinical translation. - Ali Uneri; Sebastian Schafer; Daniel Mirota; Sajendra Nithiananthan; Yoshito Otake; Sureerat Reaungamornrat; Jongheun Yoo; J. Webster Stayman; Douglas D. Reh; Gary L. Gallia; A. Jay Khanna; Gregory D. Hager; et al. (Image-Guided Procedures, 2011)

Incorporation of prior knowledge for region of change imaging from sparse scan data in image-guided surgery. - J. Lee; J. Webster Stayman; Yoshito Otake; Sebastian Schafer; Wojciech Zbijewski; Akhil Jay Khanna; Jerry L. Prince; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2012)

A clinical pilot study of a modular video-CT augmentation system for image-guided skull base surgery. - Wen P. Liu; Daniel J. Mirota; Ali Uneri; Yoshito Otake; Gregory D. Hager; Douglas D. Reh; Masaru Ishii; Gary L. Gallia; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2012)

Automatic localization of target vertebrae in spine surgery using fast CT-to-fluoroscopy (3D-2D) image registration. - Yoshito Otake; Sebastian Schafer; J. Webster Stayman; Wojciech Zbijewski; Gerhard Kleinszig; Rainer Graumann; Akhil J. Khanna; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2012)

Tracker-on-C for cone-beam CT-guided surgery: evaluation of geometric accuracy and clinical applications. - Sureerat Reaungamornrat; Yoshito Otake; Ali Uneri; Sebastian Schafer; Daniel J. Mirota; Sajendra Nithiananthan; J. Webster Stayman; Akhil Jay Khanna; Douglas D. Reh; Gary L. Gallia; Russell H. Taylor; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2012)

High-performance C-arm cone-beam CT guidance of thoracic surgery. - Sebastian Schafer; Yoshito Otake; Ali Uneri; Daniel J. Mirota; Sajendra Nithiananthan; J. Webster Stayman; Wojciech Zbijewski; Gerhard Kleinszig; Rainer Graumann; Marc S. Sussman; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2012)

Deformable registration of the inflated and deflated lung for cone-beam CT-guided thoracic surgery. - Ali Uneri; Sajendra Nithiananthan; Sebastian Schafer; Yoshito Otake; J. Webster Stayman; Gerhard Kleinszig; Marc S. Sussman; Russell H. Taylor; Jerry L. Prince; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2012)

An on-board surgical tracking and video augmentation system for C-arm image guidance. - Sureerat Reaungamornrat; Yoshito Otake; Ali Uneri; Sebastian Schafer; Daniel Mirota; Sajendra Nithiananthan; J. Webster Stayman; Gerhard Kleinszig; A. Jay Khanna; Russell H. Taylor; Jeffrey H. Siewerdsen (Int. J. Comput. Assist. Radiol. Surg., 2012)

TREK: an integrated system architecture for intraoperative cone-beam CT-guided surgery. - Ali Uneri; Sebastian Schafer; Daniel Mirota; Sajendra Nithiananthan; Yoshito Otake; Russell Highsmith Taylor; Gary L. Gallia; A. Jay Khanna; S. Lee; Douglas D. Reh; Jeffrey H. Siewerdsen (Int. J. Comput. Assist. Radiol. Surg., 2012)

Model-Based Tomographic Reconstruction of Objects Containing Known Components. - J. Webster Stayman; Yoshito Otake; Jerry L. Prince; A. Jay Khanna; Jeffrey H. Siewerdsen (IEEE Trans. Medical Imaging, 2012)

Deformable image registration with content mismatch: a demons variant to account for added material and surgical devices in the target image. - Sajendra Nithiananthan; Ali Uneri; Sebastian Schafer; Daniel Mirota; Yoshito Otake; J. Webster Stayman; Wojciech Zbijewski; Akhil Jay Khanna; Douglas D. Reh; Gary L. Gallia; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2013)

Model-based cone-beam CT reconstruction for image-guided minimally invasive treatment of hip osteolysis. - Yoshito Otake; J. Webster Stayman; Wojciech Zbijewski; Ryan J. Murphy; Michael D. M. Kutzer; Russell H. Taylor; Jeffrey H. Siewerdsen; Mehran Armand (Image-Guided Procedures, 2013)

A gaussian mixture + demons deformable registration method for cone-beam CT-guided robotic transoral base-of-tongue surgery. - Sureerat Reaungamornrat; Wen P. Liu; Sebastian Schafer; Yoshito Otake; Sajendra Nithiananthan; Ali Uneri; Jeremy D. Richmon; Jonathan M. Sorger; Jeffrey H. Siewerdsen; Russell H. Taylor (Image-Guided Procedures, 2013)

Intraoperative imaging for patient safety and QA: detection of intracranial hemorrhage using C-arm cone-beam CT. - Sebastian Schafer; Adam S. Wang; Yoshito Otake; J. Webster Stayman; Wojciech Zbijewski; Gerhard Kleinszig; Xuewei Xia; Gary L. Gallia; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2013)

An electromagnetic "Tracker-in-Table" configuration for X-ray fluoroscopy and cone-beam CT-guided surgery. - Jongheun Yoo; Sebastian Schafer; Ali Uneri; Yoshito Otake; A. Jay Khanna; Jeffrey H. Siewerdsen (Int. J. Comput. Assist. Radiol. Surg., 2013)

Evaluation of a System for High-Accuracy 3D Image-Based Registration of Endoscopic Video to C-Arm Cone-Beam CT for Image-Guided Skull Base Surgery. - Daniel Mirota; Ali Uneri; Sebastian Schafer; Sajendra Nithiananthan; Douglas D. Reh; Masaru Ishii; Gary L. Gallia; Russell H. Taylor; Gregory D. Hager; Jeffrey H. Siewerdsen (IEEE Trans. Medical Imaging, 2013)

Deformable registration for image-guided spine surgery: preserving rigid body vertebral morphology in free-form transformations. - Sureerat Reaungamornrat; Andrew Shenq-Yen Wang; Ali Uneri; Yoshito Otake; Z. Zhao; A. Jay Khanna; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2014)

Dual-projection 3D-2D registration for surgical guidance: preclinical evaluation of performance and minimum angular separation. - Ali Uneri; Yoshito Otake; Andrew Shenq-Yen Wang; Gerhard Kleinszig; Sebastian Vogt 001; Gary L. Gallia; D. Rigamonti; Jean-Paul Wolinsky; Ziya L. Gokaslan; A. Jay Khanna; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2014)

Rendering-based video-CT registration with physical constraints for image-guided endoscopic sinus surgery. - Yoshito Otake; Simon Léonard; Austin Reiter; Purnima Rajan; Jeffrey H. Siewerdsen; Gary L. Gallia; Masaru Ishii; Russell H. Taylor; Gregory D. Hager (Image-Guided Procedures, 2015)

Self-calibration of cone-beam CT geometry using 3D-2D image registration: development and application to tasked-based imaging with a robotic C-arm. - S. Ouadah; J. Webster Stayman; Grace J. Gang; Ali Uneri; Tina Ehtiati; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2015)

Known-component 3D-2D registration for image guidance and quality assurance in spine surgery pedicle screw placement. - Ali Uneri; J. Webster Stayman; Tharindu De Silva; Andrew Shenq-Yen Wang; Gerhard Kleinszig; Sebastian Vogt 001; A. Jay Khanna; Jean-Paul Wolinsky; Ziya L. Gokaslan; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2015)

Deformable 3D-2D Registration of Known Components for Image Guidance in Spine Surgery. - Ali Uneri; Joseph Görres; Tharindu De Silva; Matthew W. Jacobson; Michael D. Ketcha; Sureerat Reaungamornrat; Gerhard Kleinszig; Sebastian Vogt 001; Akhil J. Khanna; Jean-Paul Wolinsky; Jeffrey H. Siewerdsen (MICCAI (3), 2016)

Automatic masking for robust 3D-2D image registration in image-guided spine surgery. - Michael D. Ketcha; Tharindu De Silva; Ali Uneri; Gerhard Kleinszig; Sebastian Vogt 001; Jean-Paul Wolinsky; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2016)

MIND Demons for MR-to-CT deformable image registration in image-guided spine surgery. - Sureerat Reaungamornrat; Tharindu De Silva; Ali Uneri; Jean-Paul Wolinsky; A. Jay Khanna; Gerhard Kleinszig; Sebastian Vogt 001; Jerry L. Prince; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2016)

MIND Demons: Symmetric Diffeomorphic Deformable Registration of MR and CT for Image-Guided Spine Surgery. - Sureerat Reaungamornrat; Tharindu De Silva; Ali Uneri; Sebastian Vogt 001; Gerhard Kleinszig; Akhil J. Khanna; Jean-Paul Wolinsky; Jerry L. Prince; Jeffrey H. Siewerdsen (IEEE Trans. Medical Imaging, 2016)

Atlas-based automatic measurements of the morphology of the tibiofemoral joint. - Michael Brehler; Gaurav Thawait; William Shyr; John Ramsay; Jeffrey H. Siewerdsen; Wojciech Zbijewski (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2017)

Deformable 3D-2D registration for guiding K-wire placement in pelvic trauma surgery. - Joseph Görres; Matthew W. Jacobson; Ali Uneri; Tharindu De Silva; Michael D. Ketcha; Sureerat Reaungamornrat; Sebastian Vogt 001; Gerhard Kleinszig; Jean-Paul Wolinsky; G. Osgood; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2017)

Fundamental limits of image registration performance: effects of image noise and resolution in CT-guided interventions. - Michael D. Ketcha; Tharindu De Silva; Runze Han; Ali Uneri; Joseph Görres; Matthew W. Jacobson; Sebastian Vogt 001; Gerhard Kleinszig; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2017)

C-arm positioning using virtual fluoroscopy for image-guided surgery. - Tharindu De Silva; Joshua Punnoose; Ali Uneri; Joseph Görres; Matthew W. Jacobson; Michael D. Ketcha; Amir Manbachi; Sebastian Vogt 001; Gerhard Kleinszig; Akhil J. Khanna; Jean-Paul Wolinsky; G. Osgood; et al. (Image-Guided Procedures, 2017)

Integration of free-hand 3D ultrasound and mobile C-arm cone-beam CT: Feasibility and characterization for real-time guidance of needle insertion. - Eugenio Marinetto; Ali Uneri; Tharindu De Silva; Sureerat Reaungamornrat; Wojciech Zbijewski; Alejandro Sisniega; Sebastian Vogt 001; Gerhard Kleinszig; Javier Pascau; Jeffrey H. Siewerdsen (Comput. Medical Imaging Graph., 2017)

Task-Driven Optimization of Fluence Field and Regularization for Model-Based Iterative Reconstruction in Computed Tomography. - Grace J. Gang; Jeffrey H. Siewerdsen; J. Webster Stayman (IEEE Trans. Medical Imaging, 2017)

Effects of Image Quality on the Fundamental Limits of Image Registration Accuracy. - Michael D. Ketcha; Tharindu De Silva; Runze Han; Ali Uneri; Joseph Görres; Matthew W. Jacobson; Sebastian Vogt 001; Gerhard Kleinszig; Jeffrey H. Siewerdsen (IEEE Trans. Medical Imaging, 2017)

Guest Editorial Low-Dose CT: What Has Been Done, and What Challenges Remain? - Jerome Zhengrong Liang; Patrick J. La Rivière; Georges El Fakhri; Stephen J. Glick; Jeffrey H. Siewerdsen (IEEE Trans. Medical Imaging, 2017)

Robust quantitative assessment of trabecular microarchitecture in extremity cone-beam CT using optimized segmentation algorithms. - Michael Brehler; Qian Cao; K. F. Moseley; Greg Osgood; C. Morris; Shadpour Demehri; John Yorkston; Jeffrey H. Siewerdsen; Wojciech Zbijewski (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2018)

Technical note: design and validation of an open-source library of dynamic reference frames for research and education in optical tracking. - A. Brown; Ali Uneri; Tharindu De Silva; Amir Manbachi; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2018)

Automatic definition of surgical trajectories and acceptance window in pelvic trauma surgery using deformable registration. - Runze Han; B. Ramsay; Tharindu De Silva; Joseph Görres; Ali Uneri; Michael D. Ketcha; Matthew W. Jacobson; Niral Sheth; Sebastian Vogt 001; Gerhard Kleinszig; G. Osgood; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2018)

Clustered iterative sub-atlas registration for improved deformable registration using statistical shape models. - B. Ramsay; Tharindu De Silva; Runze Han; Michael D. Ketcha; Ali Uneri; Joseph Görres; Niral Sheth; Matthew W. Jacobson; Sebastian Vogt 001; Gerhard Kleinszig; G. Osgood; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2018)

Real-time, image-based 3D-2D registration for ultrasound-guided spinal interventions. - Tharindu De Silva; Ali Uneri; Xiaoxuan Zhang; Michael D. Ketcha; Runze Han; Matthew W. Jacobson; Niral Sheth; Sebastian Vogt 001; Gerhard Kleinszig; A. Belzberg; D. M. Sciubba; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2018)

Advanced image registration and reconstruction using the O-Arm system: dose reduction, image quality, and guidance using known-component models. - Ali Uneri; Xiaoxuan Zhang; J. Webster Stayman; Patrick A. Helm; G. M. Osgood; Nicholas Theodore; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2018)

Technical note: known-component registration for robotic drill guide positioning. - T. Yi; V. Ramchandran; Jeffrey H. Siewerdsen; Ali Uneri (Image-Guided Procedures, 2018)

A statistical model for image registration performance: effect of tissue deformation. - Michael D. Ketcha; Tharindu De Silva; Runze Han; Ali Uneri; Matthew W. Jacobson; Sebastian Vogt 001; Gerhard Kleinszig; Jeffrey H. Siewerdsen (Image Processing, 2018)

Coupled active shape models for automated segmentation and landmark localization in high-resolution CT of the foot and ankle. - Michael Brehler; Asef Islam; Levon Vogelsang; Dong Yang; William J. Sehnert; Delaram Shakoor; Shadpour Demehri; Jeffrey H. Siewerdsen; Wojciech Zbijewski (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2019)

Quantitative evaluation of bone microstructure using high-resolution extremity cone-beam CT with a CMOS detector. - Shalini Subramanian; Michael Brehler; Qian Cao; Fernando J. Quevedo González; Ryan E. Breighner; John A. Carrino; Timothy Wright; John I. Yorkston; Jeffrey H. Siewerdsen; Wojciech Zbijewski (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2019)

Automatic analysis of global spinal alignment from spine CT images. - Sophia A. Doerr; Tharindu De Silva; Rohan Vijayan; Runze Han; Ali Uneri; Michael D. Ketcha; Xiaoxuan Zhang; Nishanth Khanna; Erick Westbroek; Bowen Jiang 003; Corinna C. Zygourakis; Nafi Aygun; et al. (Image-Guided Procedures, 2019)

Automatic vertebrae localization in spine CT: a deep-learning approach for image guidance and surgical data science. - Marc Levine; Tharindu De Silva; Michael D. Ketcha; Rohan Vijayan; Sophia A. Doerr; Ali Uneri; S. Swaroop Vedula; Nicholas Theodore; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2019)

3D-2D image registration in virtual long-film imaging: application to spinal deformity correction. - Ali Uneri; Xiaoxuan Zhang; J. Webster Stayman; Patrick A. Helm; G. M. Osgood; Nicholas Theodore; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2019)

Automatic trajectory and instrument planning for robot-assisted spine surgery. - Rohan C. Vijayan; Tharindu S. De Silva; Runze Han; Ali Uneri; Sophia A. Doerr; Michael D. Ketcha; Alexander Perdomo-Pantoja; Nicholas Theodore; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2019)

Improved intraoperative imaging in spine surgery: clinical translation of known-component 3D image reconstruction on the O-arm system. - Xiaoxuan Zhang; Ali Uneri; Joseph Webster Stayman; Corinna C. Zygourakis; Sheng-Fu Lo; Nicholas Theodore; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2019)

Effect of statistical mismatch between training and test images for CNN-based deformable registration. - Michael D. Ketcha; Tharindu De Silva; Runze Han; Ali Uneri; Sebastian Vogt 001; Gerhard Kleinszig; Jeffrey H. Siewerdsen (Image Processing, 2019)

A Statistical Model for Rigid Image Registration Performance: The Influence of Soft-Tissue Deformation as a Confounding Noise Source. - Michael D. Ketcha; Tharindu De Silva; Runze Han; Ali Uneri; Sebastian Vogt 001; Gerhard Kleinszig; Jeffrey H. Siewerdsen (IEEE Trans. Medical Imaging, 2019)

Quantitative assessment of weight-bearing fracture biomechanics using extremity cone-beam CT. - Stephen Z. Liu; Qian Cao; Greg M. Osgood; Jeffrey H. Siewerdsen; J. Webster Stayman; Wojciech Zbijewski (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2020)

Application of a novel ultra-high resolution multi-detector CT in quantitative imaging of trabecular microstructure. - Gengxin Shi; Shalini Subramanian; Qian Cao; Shadpour Demehri; Jeffrey H. Siewerdsen; Wojciech Zbijewski (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2020)

Image-based deformable motion compensation in cone-beam CT: translation to clinical studies in interventional body radiology. - S. Capostagno; Alejandro Sisniega; J. Webster Stayman; Tina Ehtiati; Clifford R. Weiss; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2020)

Data-driven detection and registration of spine surgery instrumentation in intraoperative images. - Sophia A. Doerr; Ali Uneri; Yixuan Huang; Craig K. Jones; Xiaoxuan Zhang; Michael D. Ketcha; Patrick A. Helm; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2020)

Multi-body registration for fracture reduction in orthopaedic trauma surgery. - Runze Han; Ali Uneri; Pengwei Wu; Rohan Vijayan; Prasad Vagdargi; Michael D. Ketcha; Niral Sheth; Sebastian Vogt 001; Gerhard Kleinszig; G. M. Osgood; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2020)

SpineCloud: image analytics for predictive modeling of spine surgery outcomes. - Tharindu De Silva; S. Swaroop Vedula; Alexander Perdomo-Pantoja; Rohan Vijayan; Sophia A. Doerr; Ali Uneri; Runze Han; Michael D. Ketcha; R. L. Skolasky Jr.; Brian Caffo; Greg Hager; Timothy Witham; et al. (Image-Guided Procedures, 2020)

Multi-slot intraoperative imaging and 3D-2D registration for evaluation of long surgical constructs in spine surgery. - Ali Uneri; Xiaoxuan Zhang; Michael D. Ketcha; Sophia A. Doerr; Craig K. Jones; Patrick A. Helm; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2020)

Calibration and registration of a freehand video-guided surgical drill for orthopaedic trauma. - Prasad Vagdargi; Ali Uneri; Niral Sheth; Alejandro Sisniega; Tharindu De Silva; G. M. Osgood; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2020)

Image-guided robotic k-wire placement for orthopaedic trauma surgery. - Rohan C. Vijayan; Runze Han; Pengwei Wu; Niral Sheth; Michael D. Ketcha; Prasad Vagdargi; Sebastian Vogt 001; Gerhard Kleinszig; G. M. Osgood; Jeffrey H. Siewerdsen; Ali Uneri (Image-Guided Procedures, 2020)

Multi-slot extended view imaging on the O-Arm: image quality and application to intraoperative assessment of spinal morphology. - Xiaoxuan Zhang; Ali Uneri; Pengwei Wu; Michael D. Ketcha; Sophia A. Doerr; Craig K. Jones; Patrick A. Helm; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2020)

Surgineering: curriculum concept for experiential learning in upper-level biomedical engineering. - Jeffrey H. Siewerdsen; G. L. Adrales; William S. Anderson; John P. Carey; Francis X. Creighton; S. R. DiBrito; Deepa Galaiya; M. R. Marohn; T. R. McNutt; G. M. Osgood; Nicholas Theodore; Clifford R. Weiss; et al. (Int. J. Comput. Assist. Radiol. Surg., 2020)

Intraoperative guidance of orthopaedic instruments using 3D correspondence of 2D object instance segmentations. - I. Bataeva; K. Shah; Rohan Vijayan; Runze Han; Niral Sheth; Gerhard Kleinszig; Sebastian Vogt 001; Greg M. Osgood; Jeffrey H. Siewerdsen; Ali Uneri (Image-Guided Procedures, 2021)

Deformable MR-CT image registration using an unsupervised synthesis and registration network for neuro-endoscopic surgery. - Runze Han; Craig K. Jones; Michael D. Ketcha; Pengwei Wu; Prasad Vagdargi; Ali Uneri; Junghoon Lee; Mark G. Luciano; William S. Anderson; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2021)

Pre-clinical evaluation of a video-based drill guidance system for orthopaedic trauma surgery. - Niral Sheth; Prasad Vagdargi; Alejandro Sisniega; Ali Uneri; Greg M. Osgood; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2021)

Data-driven deformable 3D-2D registration for guiding neuroelectrode placement in deep brain stimulation. - Ali Uneri; Pengwei Wu; Craig K. Jones; Michael D. Ketcha; Prasad Vagdargi; Runze Han; Patrick A. Helm; Mark G. Luciano; William S. Anderson; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2021)

Robot-assisted ventriculoscopic 3D reconstruction for guidance of deep-brain stimulation surgery. - Prasad Vagdargi; Ali Uneri; Craig K. Jones; Pengwei Wu; Runze Han; Mark G. Luciano; William S. Anderson; Gregory D. Hager; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2021)

Fluoroscopic guidance of a surgical robot: pre-clinical evaluation in pelvic guidewire placement. - Rohan C. Vijayan; Runze Han; Pengwei Wu; Niral Sheth; Prasad Vagdargi; Sebastian Vogt 001; Gerhard Kleinszig; Greg M. Osgood; Jeffrey H. Siewerdsen; Ali Uneri (Image-Guided Procedures, 2021)

Fracture reduction planning and guidance in orthopaedic trauma surgery via multi-body image registration. - Runze Han; Ali Uneri; Rohan C. Vijayan; Pengwei Wu; Prasad Vagdargi; Niral Sheth; Sebastian Vogt 001; Gerhard Kleinszig; G. M. Osgood; Jeffrey H. Siewerdsen (Medical Image Anal., 2021)

Deformable registration of MRI to intraoperative cone-beam CT of the brain using a joint synthesis and registration network. - Runze Han; Craig K. Jones; Pengwei Wu; Prasad Vagdargi; Xiaoxuan Zhang; Ali Uneri; Junghoon Lee; Mark G. Luciano; William S. Anderson; Patrick A. Helm; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2022)

Automatic labeling of vertebrae in long-length intraoperative imaging with a multi-view, region-based CNN. - Yixuan Huang; Craig K. Jones; Xiaoxuan Zhang; Ashley Johnston; Nafi Aygun; Timothy Witham; Patrick A. Helm; Jeffrey H. Siewerdsen; Ali Uneri (Image-Guided Procedures, 2022)

Non-circular CBCT orbit design and realization on a clinical robotic C-arm for metal artifact reduction. - Yiqun Ma; Grace J. Gang; Tina Ehtiati; Tess Reynolds; Tom Russ; Wenying Wang; Clifford R. Weiss; Nicholas Theodore; Kelvin Hong; Jeffrey H. Siewerdsen; J. Webster Stayman (Image-Guided Procedures, 2022)

Statistical shape and pose modeling for automated planning in robot-assisted reduction of the ankle syndesmosis. - Ali Uneri; Corey Simmerer; Wojciech Zbijewski; Runze Han; Gerhard Kleinszig; Sebastian Vogt 001; Kevin Cleary; Jeffrey H. Siewerdsen; Babar Shafiq (Image-Guided Procedures, 2022)

Robot-assisted neuroendoscopy for real-time 3D guidance of transventricular approach to deep-brain targets. - Prasad Vagdargi; Ali Uneri; Craig K. Jones; Pengwei Wu; Runze Han; Mark G. Luciano; William S. Anderson; Patrick A. Helm; Gregory D. Hager; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2022)

Motion-compensated targeting in pulmonary interventions using cone-beam CT and locally rigid / globally deformable 3D-2D registration. - Rohan C. Vijayan; Niral Sheth; Lina Mekki; Alexander Lu; Ali Uneri; Alejandro Sisniega; Jessica Maggaragia; Gerhard Kleinszig; Sebastian Vogt 001; Jeffrey Thiboutot; Hans Lee; Lonny Yarmus; et al. (Image-Guided Procedures, 2022)

Detection of fibular rotational changes in cone beam CT: experimental study in a specimen model. - Nils Beisemann; Antonella M. Tilk; Jula Gierse; Paul Alfred Grützner; Jochen Franke; Jeffrey H. Siewerdsen; Sven Yves Vetter (BMC Medical Imaging, 2022)

Quantification of manipulation forces needed for robot-assisted reduction of the ankle syndesmosis: an initial cadaveric study. - Mikias Gebremeskel; Babar Shafiq; Ali Uneri; Niral Sheth; Corey Simmerer; Wojciech Zbijewski; Jeffrey H. Siewerdsen; Kevin Cleary; Gang Li 018 (Int. J. Comput. Assist. Radiol. Surg., 2022)

Multi-perspective region-based CNNs for vertebrae labeling in intraoperative long-length images. - Yixuan Huang; Craig K. Jones; Xinlei Zhang; Ashley Johnston; Selam Waktola; Nafi Aygun; Timothy Witham; Ali Bydon; Nicholas Theodore; Patrick A. Helm; Jeffrey H. Siewerdsen; Ali Uneri (Comput. Methods Programs Biomed., 2022)

Deformable MR-CT image registration using an unsupervised, dual-channel network for neurosurgical guidance. - Runze Han; Craig K. Jones; Junghoon Lee; Pengwei Wu; Prasad Vagdargi; Ali Uneri; Patrick A. Helm; Mark G. Luciano; William S. Anderson; Jeffrey H. Siewerdsen (Medical Image Anal., 2022)

Effects of non-stationary blur on texture biomarkers of bone using ultra-high resolution CT. - Gengxin Shi; Fernando J. Quevedo González; Ryan E. Breighneer; John A. Carrino; Jeffrey H. Siewerdsen; Wojciech Zbijewski (Biomedical Applications in Molecular, Structural, and Functional Imaging, 2023)

Multi-modality registration of preoperative MR and intraoperative long-length tomosynthesis using GAN synthesis and 3D-2D registration. - Yixuan Huang; Xiaoxuan Zhang; Ashley Johnston; Craig K. Jones; Jeffrey H. Siewerdsen; Wojciech Zbijewski; Patrick A. Helm; Brendan Judy; Amanda Sacino; Ali Bydon; Timothy Witham; Ali Uneri (Image-Guided Procedures, 2023)

Deformable motion compensation for intraprocedural vascular cone-beam CT with sequential projection domain targeting and vessel-enhancing autofocus. - Alexander Lu; Heyuan Huang; Yicheng Hu; Wojtek Zbijewski; Mathias Unberath; Jeffrey H. Siewerdsen; Clifford R. Weiss; Alejandro Sisniega (Image-Guided Procedures, 2023)

Real-time 3D neuroendoscopic guidance using SLAM: first clinical studies. - Prasad Vagdargi; Ali Uneri; Craig K. Jones; Xiaoxuan Zhang; Pengwei Wu; Runze Han; Alejandro Sisniega; Junghoon Lee; Patrick A. Helm; Mark G. Luciano; William S. Anderson; Gregory D. Hager; et al. (Image-Guided Procedures, 2023)

Multi-body 3D-2D registration for robot-assisted joint reduction: preclinical evaluation in the ankle syndesmosis. - Rohan C. Vijayan; K. Venkataraman; J. Wei; Niral Sheth; Babar Shafiq; Jeffrey H. Siewerdsen; Wojciech Zbijewski; Gang Li 018; Kevin Cleary; Ali Uneri (Image-Guided Procedures, 2023)

Image Guidance for Robot-Assisted Ankle Fracture Repair. - Asef Islam; Anthony Wu; Jay Mandavilli; Wojtek Zbijewski; Jeffrey H. Siewerdsen (CoRR, 2023)

Deformable registration of preoperative MR and intraoperative long-length tomosynthesis images for guidance of spine surgery via image synthesis. - Yixuan Huang; Xiaoxuan Zhang; Yicheng Hu; Ashley Johnston; Craig K. Jones; Wojciech Zbijewski; Jeffrey H. Siewerdsen; Patrick A. Helm; Timothy Witham; Ali Uneri (Comput. Medical Imaging Graph., 2024)

Vessel-targeted compensation of deformable motion in interventional cone-beam CT. - Alexander Lu; Heyuan Huang; Yicheng Hu; Wojciech Zbijewski; Mathias Unberath; Jeffrey H. Siewerdsen; Clifford R. Weiss; Alejandro Sisniega (Medical Image Anal., 2024)

Self-Supervised Feature Detection and 3D Reconstruction for Real-Time Neuroendoscopic Guidance. - Prasad Vagdargi; Ali Uneri; Stephen Z. Liu; Craig K. Jones; Alejandro Sisniega; Junghoon Lee; Patrick A. Helm; Ryan P. Lee; Mark G. Luciano; Gregory D. Hager; Jeffrey H. Siewerdsen (IEEE Trans. Biomed. Eng., 2025)