Parallel Algorithms for Collective Processes in High Intensity Rings. - Andrei Shishlo; Jeffrey Holmes; Viatcheslav Danilov (International Conference on Computational Science (3), 2002)

Designing agents to support learning by explaining. - Jeffrey Holmes (Comput. Educ., 2007)

The Particle Accelerator Simulation Code PyORBIT. - Andrei Shishlo; Sarah Cousineau; Jeffrey Holmes; Timofey Gorlov (ICCS, 2015)