EXIMS: an improved data analysis pipeline based on a new peak picking method for EXploring Imaging Mass Spectrometry data. - Chalini D. Wijetunge; Isaam Saeed; Berin A. Boughton; Jeffrey M. Spraggins; Richard M. Caprioli; Antony Bacic; Ute Roessner; Saman K. Halgamuge (Bioinform., 2015)

The human body at cellular resolution: the NIH Human Biomolecular Atlas Program. - Michael P. Snyder; Shin Lin; Amanda Posgai; Mark Atkinson; Aviv Regev; Jennifer Rood; Orit Rozenblatt-Rosen; Leslie Gaffney; Anna Hupalowska; Rahul Satija; Nils Gehlenborg; Jay Shendure; et al. (Nat., 2019)

Construction and Usage of a Human Body Common Coordinate Framework Comprising Clinical, Semantic, and Spatial Ontologies. - Katy Börner; Ellen M. Quardokus; Bruce William Herr II; Leonard E. Cross; Elizabeth G. Record; Yingnan Ju; Andreas D. Bueckle; James P. Sluka; Jonathan C. Silverstein; Kristen M. Browne; Sanjay Jain 006; Clive H. Wasserfall; et al. (CoRR, 2020)

Pancreas CT Segmentation by Predictive Phenotyping. - Yucheng Tang; Riqiang Gao; Ho Hin Lee; Qi Yang 004; Xin Yu 010; Yuyin Zhou; Shunxing Bao; Yuankai Huo; Jeffrey M. Spraggins; Jack Virostko; Zhoubing Xu; Bennett A. Landman (MICCAI (1), 2021)

Construction of a multi-phase contrast computed tomography kidney atlas. - Ho Hin Lee; Yucheng Tang; Kaiwen Xu; Shunxing Bao; Agnes B. Fogo; Raymond Harris; Mark P. de Caestecker; Mattias P. Heinrich; Jeffrey M. Spraggins; Yuankai Huo; Bennett A. Landman (Image Processing, 2021)

Renal cortex, medulla and pelvicaliceal system segmentation on arterial phase CT images with random patch-based networks. - Yucheng Tang; Riqiang Gao; Ho Hin Lee; Zhoubing Xu; Brent V. Savoie; Shunxing Bao; Yuankai Huo; Agnes B. Fogo; Raymond Harris; Mark P. de Caestecker; Jeffrey M. Spraggins; Bennett A. Landman (Image Processing, 2021)

Supervised deep generation of high-resolution arterial phase computed tomography kidney substructure atlas. - Ho Hin Lee; Yucheng Tang; Shunxing Bao; Yan Xu; Qi Yang 004; Xin Yu 010; Agnes B. Fogo; Raymond Harris; Mark P. de Caestecker; Jeffrey M. Spraggins; Mattias P. Heinrich; Yuankai Huo; et al. (Image Processing, 2022)

Multi-contrast computed tomography healthy kidney atlas. - Ho Hin Lee; Yucheng Tang; Kaiwen Xu; Shunxing Bao; Agnes B. Fogo; Raymond Harris; Mark P. de Caestecker; Mattias P. Heinrich; Jeffrey M. Spraggins; Yuankai Huo; Bennett A. Landman (Comput. Biol. Medicine, 2022)

Unsupervised registration refinement for generating unbiased eye atlas. - Ho Hin Lee; Yucheng Tang; Shunxing Bao; Qi Yang 004; Xin Yu 010; Kevin L. Schey; Jeffrey M. Spraggins; Yuankai Huo; Bennett A. Landman (Image Processing, 2023)

Multi-Contrast Computed Tomography Atlas of Healthy Pancreas. - Yinchi Zhou; Ho Hin Lee; Yucheng Tang; Xin Yu 010; Qi Yang 004; Shunxing Bao; Jeffrey M. Spraggins; Yuankai Huo; Bennett A. Landman (CoRR, 2023)

Super-Resolution Multi-Contrast Unbiased Eye Atlases With Deep Probabilistic Refinement. - Ho Hin Lee; Adam M. Saunders; Michael E. Kim; Samuel W. Remedios; Yucheng Tang; Qi Yang 004; Xin Yu 010; Shunxing Bao; Chloe Cho; Louise A. Mawn; Tonia S. Rex; Kevin L. Schey; et al. (CoRR, 2024)

Virtual Staining of Label-Free Tissue in Imaging Mass Spectrometry. - Yijie Zhang; Luzhe Huang; Nir Pillar; Yuzhu Li; Lukasz G. Migas; Raf Van de Plas; Jeffrey M. Spraggins; Aydogan Ozcan (CoRR, 2024)

Signal Recovery Using a Spiked Mixture Model. - Paul-Louis Delacour; Sander Wahls; Jeffrey M. Spraggins; Lukasz G. Migas; Raf Van de Plas (CoRR, 2025)