Use of augmented Lagrangians in the calculation of molecular conformations by distance geometry. - Gordon M. Crippen; Andrew Smellie; Jeffrey W. Peng (J. Chem. Inf. Comput. Sci., 1988)

Biomolecular Path Sampling Enabled by Processing in Network Storage. - Paul R. Brenner; Justin M. Wozniak; Douglas Thain; Aaron Striegel; Jeffrey W. Peng; Jesús A. Izaguirre (IPDPS, 2007)

Biomolecular committor probability calculation enabled by processing in network storage. - Paul R. Brenner; Justin M. Wozniak; Douglas Thain; Aaron Striegel; Jeffrey W. Peng; Jesús A. Izaguirre (Parallel Comput., 2008)

Modeling Conformational Ensembles of Slow Functional Motions in Pin1-WW. - Faruck Morcos; Santanu Chatterjee; Christopher L. McClendon; Paul R. Brenner; Roberto López-Rendón; John Zintsmaster; Mária Ercsey-Ravasz; Christopher R. Sweet; Matthew P. Jacobson; Jeffrey W. Peng; Jesús A. Izaguirre (PLoS Comput. Biol., 2010)