De Novo Signaling Pathway Predictions Based on Protein-Protein Interaction, Targeted Therapy and Protein Microarray Analysis. - Derek A. Ruths; Jen-Te Tseng; Luay Nakhleh; Prahlad T. Ram (Systems Biology and Computational Proteomics, 2006)

The Signaling Petri Net-Based Simulator: A Non-Parametric Strategy for Characterizing the Dynamics of Cell-Specific Signaling Networks. - Derek A. Ruths; Melissa Muller; Jen-Te Tseng; Luay Nakhleh; Prahlad T. Ram (PLoS Comput. Biol., 2008)