Exploiting Context for Biomedical Entity Recognition: From Syntax to the Web. - Jenny Rose Finkel; Shipra Dingare; Huy Nguyen; Malvina Nissim; Christopher D. Manning; Gail Sinclair (NLPBA/BioNLP, 2004)

Incorporating Non-local Information into Information Extraction Systems by Gibbs Sampling. - Jenny Rose Finkel; Trond Grenager; Christopher D. Manning (ACL, 2005)

Exploring the boundaries: gene and protein identification in biomedical text. - Jenny Rose Finkel; Shipra Dingare; Christopher D. Manning; Malvina Nissim; Beatrice Alex; Claire Grover (BMC Bioinform., 2005)

Solving the Problem of Cascading Errors: Approximate Bayesian Inference for Linguistic Annotation Pipelines. - Jenny Rose Finkel; Christopher D. Manning; Andrew Y. Ng (EMNLP, 2006)

The Infinite Tree. - Jenny Rose Finkel; Trond Grenager; Christopher D. Manning (ACL, 2007)

Efficient, Feature-based, Conditional Random Field Parsing. - Jenny Rose Finkel; Alex Kleeman; Christopher D. Manning (ACL, 2008)

Enforcing Transitivity in Coreference Resolution. - Jenny Rose Finkel; Christopher D. Manning (ACL (2), 2008)

Nested Named Entity Recognition. - Jenny Rose Finkel; Christopher D. Manning (EMNLP, 2009)

Joint Parsing and Named Entity Recognition. - Jenny Rose Finkel; Christopher D. Manning (HLT-NAACL, 2009)

Hierarchical Bayesian Domain Adaptation. - Jenny Rose Finkel; Christopher D. Manning (HLT-NAACL, 2009)

Hierarchical Joint Learning: Improving Joint Parsing and Named Entity Recognition with Non-Jointly Labeled Data. - Jenny Rose Finkel; Christopher D. Manning (ACL, 2010)

Holistic language processing : joint models of linguistic structure. - Jenny Rose Finkel (2010)

The Stanford CoreNLP Natural Language Processing Toolkit. - Christopher D. Manning; Mihai Surdeanu; John Bauer; Jenny Rose Finkel; Steven Bethard; David McClosky (ACL (System Demonstrations), 2014)