MIRPIPE: quantification of microRNAs in niche model organisms. - Carsten Kuenne; Jens Preussner; Mario Herzog; Thomas Braun; Mario Looso (Bioinform., 2014)

LimiTT: link miRNAs to targets. - Julia Bayer; Carsten Kuenne; Jens Preussner; Mario Looso (BMC Bioinform., 2016)

WIlsON: Web-based Interactive Omics VisualizatioN. - Hendrik Schultheis; Carsten Kuenne; Jens Preussner; Rene Wiegandt; Annika Fust; Mette Bentsen; Mario Looso (Bioinform., 2019)

Development and application of computational methods for cancer subtype detection from -omics data. - Jens Preussner (2020)

i2dash: Creation of Flexible, Interactive, and Web-based Dashboards for Visualization of Omics Data. - Arsenij Ustjanzew; Jens Preussner; Mette Bentsen; Carsten Kuenne; Mario Looso (Genom. Proteom. Bioinform., 2022)