Flux-Based Transport Enhancement as a Plausible Unifying Mechanism for Auxin Transport in Meristem Development. - Szymon Stoma; Mikael Lucas; Jérôme Chopard; Marianne Schaedel; Jan Traas; Christophe Godin (PLoS Comput. Biol., 2008)

PlantGL: A Python-based geometric library for 3D plant modelling at different scales. - Christophe Pradal; Frédéric Boudon; C. Nouguier; Jérôme Chopard; Christophe Godin (Graph. Model., 2009)

A Computational Framework for 3D Mechanical Modeling of Plant Morphogenesis with Cellular Resolution. - Frédéric Boudon; Jérôme Chopard; Olivier Ali; Benjamin Gilles; Olivier Hamant; Arezki Boudaoud; Jan Traas; Christophe Godin (PLoS Comput. Biol., 2015)

Scientific workflows for computational reproducibility in the life sciences: Status, challenges and opportunities. - Sarah Cohen Boulakia; Khalid Belhajjame; Olivier Collin; Jérôme Chopard; Christine Froidevaux; Alban Gaignard; Konrad Hinsen; Pierre Larmande; Yvan Le Bras; Frédéric Lemoine 002; Fabien Mareuil; Hervé Ménager; et al. (Future Gener. Comput. Syst., 2017)

InfraPhenoGrid: A scientific workflow infrastructure for plant phenomics on the Grid. - Christophe Pradal; Simon Artzet; Jérôme Chopard; Dimitri Dupuis; Christian Fournier; Michael Mielewczik; Vincent Nègre; Pascal Neveu; Didier Parigot; Patrick Valduriez; Sarah Cohen Boulakia (Future Gener. Comput. Syst., 2017)