Modeling protein structures from predicted contacts with modern molecular dynamics potentials: accuracy, sensitivity, and refinement. - Russell B. Davidson; Mathialakan Thavappiragasam; T. Chad Effler; Jess Woods; Dwayne A. Elias; Jerry M. Parks; Ada Sedova (BCB, 2021)

Efficient Representation of Numerical Optimization Problems for SNARKs. - Sebastian Angel; Andrew J. Blumberg; Eleftherios Ioannidis; Jess Woods (IACR Cryptol. ePrint Arch., 2021)

OpenMDlr: parallel, open-source tools for general protein structure modeling and refinement from pairwise distances. - Russell B. Davidson; Jess Woods; T. Chad Effler; Mathialakan Thavappiragasam; Julie C. Mitchell; Jerry M. Parks; Ada Sedova (Bioinform., 2022)

Reef: Fast Succinct Non-Interactive Zero-Knowledge Regex Proofs. - Sebastian Angel; Eleftherios Ioannidis; Elizabeth Margolin; Srinath T. V. Setty; Jess Woods (IACR Cryptol. ePrint Arch., 2023)

Flamingo: Multi-Round Single-Server Secure Aggregation with Applications to Private Federated Learning. - Yiping Ma 001; Jess Woods; Sebastian Angel; Antigoni Polychroniadou; Tal Rabin (IACR Cryptol. ePrint Arch., 2023)

Coral: Fast Succinct Non-Interactive Zero-Knowledge CFG Proofs. - Sebastian Angel; Sofía Celi; Elizabeth Margolin; Pratyush Mishra; Martin Sander; Jess Woods (IACR Cryptol. ePrint Arch., 2025)