Concept Recognition and the TREC Genomics Tasks. - J. Gregory Caporaso; William A. Baumgartner Jr.; K. Bretonnel Cohen; Helen L. Johnson 001; Jesse Paquette; Lawrence Hunter (TREC, 2005)

EGAN: exploratory gene association networks. - Jesse Paquette; Taku A. Tokuyasu (Bioinform., 2010)

Hypergraph visualization and enrichment statistics: how the EGAN paradigm facilitates organic discovery from big data. - Jesse Paquette; Taku A. Tokuyasu (Human Vision and Electronic Imaging, 2011)

An eQTL biological data visualization challenge and approaches from the visualization community. - Christopher W. Bartlett; Soo Yeon Cheong; Liping Hou; Jesse Paquette; Pek Yee Lum; Günter Jäger; Florian Battke; Corinna Vehlow; Julian Heinrich; Kay Nieselt; Ryo Sakai; Jan Aerts; et al. (BMC Bioinform., 2012)