Transforming the study of organisms: Phenomic data models and knowledge bases. - Anne E. Thessen; Ramona L. Walls; Lars Vogt; Jessica Singer; Robert Warren; Pier Luigi Buttigieg; James P. Balhoff; Christopher J. Mungall; Deborah L. McGuinness; Brian J. Stucky; Matthew J. Yoder; Melissa A. Haendel (PLoS Comput. Biol., 2020)

Beverage Graph: Connecting Data about Consumable Liquids. - Robert Warren; Jessica Singer (JOWO, 2021)

A polyhedral study of the maximum-impact coloring problem on hypergraphs. - Jessica Singer; Javier Marenco (Discret. Appl. Math., 2025)