IsoPlot: a database for comparison of mRNA isoforms in fruit fly and mosquitoes. - I-Man Ng; Jia-Hsin Huang; Shang-Chi Tsai; Huai-Kuang Tsai (Database J. Biol. Databases Curation, 2017)

CATANA: a tool for generating comprehensive annotations of alternative transcript events. - Cheng-Kai Shiau; Jia-Hsin Huang; Huai-Kuang Tsai (Bioinform., 2019)

pubmedKB: an interactive web server for exploring biomedical entity relations in the biomedical literature. - Peng-Hsuan Li; Ting-Fu Chen; Jheng-Ying Yu; Shang-Hung Shih; Chan-Hung Su; Yin-Hung Lin; Huai-Kuang Tsai; Hsueh-Fen Juan; Chien-Yu Chen 001; Jia-Hsin Huang (Nucleic Acids Res., 2022)

A large language model framework for literature-based disease-gene association prediction. - Peng-Hsuan Li; Yih-Yun Sun; Hsueh-Fen Juan; Chien-Yu Chen 001; Huai-Kuang Tsai; Jia-Hsin Huang (Briefings Bioinform., 2024)