Parallel Computing of the Adaptive N-Body Treecode Algorithm for Solving Boundary Integral Poisson-Boltzmann Equation. - Jiahui Chen 006; Weihua Geng (HPCA (China), 2015)

On preconditioning the treecode-accelerated boundary integral (TABI) Poisson-Boltzmann solver. - Jiahui Chen 006; Weihua Geng (J. Comput. Phys., 2018)

SARS-CoV-2 becoming more infectious as revealed by algebraic topology and deep learning. - Jiahui Chen 006; Rui Wang 072; Guo-Wei Wei 001 (Commun. Inf. Syst., 2021)

MLIMC: Machine learning-based implicit-solvent Monte Carlo. - Jiahui Chen 006; Weihua Geng; Guo-Wei Wei 001 (CoRR, 2021)

Cyclically parallelized treecode for fast computations of electrostatic interactions on molecular surfaces. - Jiahui Chen 006; Weihua Geng; Daniel R. Reynolds (Comput. Phys. Commun., 2021)

Persistent Laplacian projected Omicron BA.4 and BA.5 to become new dominating variants. - Jiahui Chen 006; Yuchi Qiu; Rui Wang 072; Guo-Wei Wei 001 (Comput. Biol. Medicine, 2022)

Mathematical artificial intelligence design of mutation-proof COVID-19 monoclonal antibodies. - Jiahui Chen 006; Guowei Wei 001 (Commun. Inf. Syst., 2022)

Computing electrostatic binding energy with the TABI Poisson-Boltzmann solver. - Leighton Wilson; Jingzhen Hu; Jiahui Chen 006; Robert Krasny; Weihua Geng (Commun. Inf. Syst., 2022)

Omicron Variant (B.1.1.529): Infectivity, Vaccine Breakthrough, and Antibody Resistance. - Jiahui Chen 006; Rui Wang 072; Nancy Benovich Gilby; Guo-Wei Wei 001 (J. Chem. Inf. Model., 2022)

Emerging Dominant SARS-CoV-2 Variants. - Jiahui Chen 006; Rui Wang 072; Yuta Hozumi; Gengzhuo Liu; Yuchi Qiu; Xiaoqi Wei; Guo-Wei Wei 001 (J. Chem. Inf. Model., 2023)

A Cartesian FMM-accelerated Galerkin boundary integral Poisson-Boltzmann solver. - Jiahui Chen 006; Johannes Tausch; Weihua Geng (J. Comput. Phys., 2023)

Topological deep learning based deep mutational scanning. - Jiahui Chen 006; Daniel R. Woldring; Faqing Huang; Xuefei Huang; Guo-Wei Wei 001 (Comput. Biol. Medicine, 2023)

Preventing future zoonosis: SARS-CoV-2 mutations enhance human-animal cross-transmission. - Junjie Wee; Jiahui Chen 006; Guo-Wei Wei 001 (Comput. Biol. Medicine, 2024)

Combinatorial and Hodge Laplacians: Similarities and Differences. - Emily Ribando-Gros; Rui Wang 072; Jiahui Chen 006; Yiying Tong; Guo-Wei Wei 001 (SIAM Rev., 2024)

Integration of persistent Laplacian and pre-trained transformer for protein solubility changes upon mutation. - Junjie Wee; Jiahui Chen 006; Kelin Xia; Guo-Wei Wei 001 (Comput. Biol. Medicine, 2024)