3D-Stereoscopic Immersive Analytics Projects at Monash University and University of Konstanz. - Björn Sommer 001; David G. Barnes; Sarah E. Boyd; Tom Chandler; Maxime Cordeil; Tobias Czauderna; Matthias Klapperstück; Karsten Klein 001; Toàn D. Nguyên; Hieu T. Nim; Kingsley Stephens; Dany Vohl; et al. (SD&A, 2017)

Design and Evaluation of Novel Polymyxin Fluorescent Probes. - Bo Yun; Kade D. Roberts; Philip E. Thompson; Roger L. Nation; Tony Velkov; Jian Li 052 (Sensors, 2017)

iLearn : an integrated platform and meta-learner for feature engineering, machine-learning analysis and modeling of DNA, RNA and protein sequence data. - Zhen Chen 009; Pei Zhao; Fuyi Li; Tatiana T. Marquez-Lago; André Leier; Jerico Nico De Leon Revote; Yan Zhu 006; David R. Powell; Tatsuya Akutsu; Geoffrey I. Webb; Kuo-Chen Chou; Alexander Ian Smith; et al. (Briefings Bioinform., 2020)

PRISMOID: a comprehensive 3D structure database for post-translational modifications and mutations with functional impact. - Fuyi Li; Cunshuo Fan; Tatiana T. Marquez-Lago; André Leier; Jerico Nico De Leon Revote; Cangzhi Jia; Yan Zhu 006; Alexander Ian Smith; Geoffrey I. Webb; Quanzhong Liu; Leyi Wei; Jian Li 052; et al. (Briefings Bioinform., 2020)

A comprehensive review and performance evaluation of bioinformatics tools for HLA class I peptide-binding prediction. - Shutao Mei; Fuyi Li; André Leier; Tatiana T. Marquez-Lago; Kailin Giam; Nathan P. Croft; Tatsuya Akutsu; Alexander Ian Smith; Jian Li 052; Jamie Rossjohn; Anthony W. Purcell; Jiangning Song (Briefings Bioinform., 2020)

Procleave: Predicting Protease-specific Substrate Cleavage Sites by Combining Sequence and Structural Information. - Fuyi Li; André Leier; Quanzhong Liu; Yanan Wang 003; Dongxu Xiang; Tatsuya Akutsu; Geoffrey I. Webb; Alexander Ian Smith; Tatiana T. Marquez-Lago; Jian Li 052; Jiangning Song (Genom. Proteom. Bioinform., 2020)

Comprehensive assessment of machine learning-based methods for predicting antimicrobial peptides. - Jing Xu 008; Fuyi Li; André Leier; Dongxu Xiang; Hsin-Hui Shen; Tatiana T. Marquez-Lago; Jian Li 052; Dong-Jun Yu; Jiangning Song (Briefings Bioinform., 2021)

Visual exploration of large metabolic models. - Michael Aichem; Tobias Czauderna; Yan Zhu 006; Jinxin Zhao; Matthias Klapperstück; Karsten Klein 001; Jian Li 052; Falk Schreiber (Bioinform., 2021)

A Deep Learning-Based Method for Identification of Bacteriophage-Host Interaction. - Menglu Li; Yanan Wang 003; Fuyi Li; Yun Zhao; Mengya Liu; Sijia Zhang; Yannan Bin; Alexander Ian Smith; Geoffrey I. Webb; Jian Li 052; Jiangning Song; Junfeng Xia (IEEE ACM Trans. Comput. Biol. Bioinform., 2021)

ASPIRER: a new computational approach for identifying non-classical secreted proteins based on deep learning. - Xiaoyu Wang 016; Fuyi Li; Jing Xu 008; Jia Rong; Geoffrey I. Webb; Zongyuan Ge; Jian Li 052; Jiangning Song (Briefings Bioinform., 2022)

Towards a hybrid user interface for the visual exploration of large biomolecular networks using virtual reality. - Michael Aichem; Karsten Klein 001; Tobias Czauderna; Dimitar Garkov; Jinxin Zhao; Jian Li 052; Falk Schreiber (J. Integr. Bioinform., 2022)

Multi-modality data-driven analysis of diagnosis and treatment of psoriatic arthritis. - Jing Xu 008; Jiarui Ou; Chen Li 021; Zheng Zhu; Jian Li 052; Hailun Zhang; Junchen Chen; Bin Yi; Wu Zhu; Weiru Zhang; Guanxiong Zhang; Qian Gao; et al. (npj Digit. Medicine, 2023)

iAMPCN: a deep-learning approach for identifying antimicrobial peptides and their functional activities. - Jing Xu 008; Fuyi Li; Chen Li 021; Xudong Guo; Cornelia B. Landersdorfer; Hsin-Hui Shen; Anton Y. Peleg; Jian Li 052; Seiya Imoto; Jianhua Yao 001; Tatsuya Akutsu; Jiangning Song (Briefings Bioinform., 2023)

PmxPred: A data-driven approach for the identification of active polymyxin analogues against gram-negative bacteria. - Xiaoyu Wang 016; Nitin Patil; Fuyi Li; Zhikang Wang; Haolan Zhan; Daniel Schmidt; Philip Thompson; Yuming Guo 001; Cornelia B. Landersdorfer; Hsin-Hui Shen; Anton Y. Peleg; Jian Li 052; et al. (Comput. Biol. Medicine, 2024)