The Protein Information Resource: an integrated public resource of functional annotation of proteins. - Cathy H. Wu; Hongzhan Huang; Leslie Arminski; Jorge Castro-Alvear; Yongxing Chen; Zhang-Zhi Hu; Robert S. Ledley; Kali C. Lewis; Hans-Werner Mewes; Bruce C. Orcutt; Baris E. Suzek; Akira Tsugita; et al. (Nucleic Acids Res., 2002)

The Protein Information Resource. - Cathy H. Wu; Lai-Su L. Yeh; Hongzhan Huang; Leslie Arminski; Jorge Castro-Alvear; Yongxing Chen; Zhang-Zhi Hu; Panagiotis Kourtesis; Robert S. Ledley; Baris E. Suzek; Cholanayakanahalli R. Vinayaka; Jian Zhang 051; et al. (Nucleic Acids Res., 2003)

PIRSF: family classification system at the Protein Information Resource. - Cathy H. Wu; Anastasia N. Nikolskaya; Hongzhan Huang; Lai-Su L. Yeh; Darren A. Natale; Cholanayakanahalli R. Vinayaka; Zhang-Zhi Hu; Raja Mazumder; Sandeep Kumar; Panagiotis Kourtesis; Robert S. Ledley; Baris E. Suzek; et al. (Nucleic Acids Res., 2004)

BioThesaurus: a web-based thesaurus of protein and gene names. - Hongfang Liu; Zhang-Zhi Hu; Jian Zhang 051; Cathy H. Wu (Bioinform., 2006)

Protein-Centric Connection of Biomedical Knowledge: Protein Ontology (PRO) Research and Annotation Tools. - Cecilia N. Arighi; Darren A. Natale; Judith A. Blake; Carol J. Bult; Michael Caudy; Alexander D. Diehl; Harold J. Drabkin; Peter D'Eustachio; Alexei V. Evsikov; Hongzhan Huang; Natalia V. Roberts; Alan Ruttenberg; et al. (ICBO, 2011)

A comprehensive protein-centric ID mapping service for molecular data integration. - Hongzhan Huang; Peter B. McGarvey; Baris E. Suzek; Raja Mazumder; Jian Zhang 051; Yongxing Chen; Cathy H. Wu (Bioinform., 2011)

The Protein Ontology: a structured representation of protein forms and complexes. - Darren A. Natale; Cecilia N. Arighi; Winona C. Barker; Judith A. Blake; Carol J. Bult; Michael Caudy; Harold J. Drabkin; Peter D'Eustachio; Alexei V. Evsikov; Hongzhan Huang; Jules Nchoutmboube; Natalia V. Roberts; et al. (Nucleic Acids Res., 2011)

Protein Ontology: a controlled structured network of protein entities. - Darren A. Natale; Cecilia N. Arighi; Judith A. Blake; Carol J. Bult; Karen R. Christie; Julie Cowart; Peter D'Eustachio; Alexander D. Diehl; Harold J. Drabkin; Olivia Helfer; Hongzhan Huang; Anna Maria Masci; et al. (Nucleic Acids Res., 2014)

Computational clustering for viral reference proteomes. - Chuming Chen; Hongzhan Huang; Raja Mazumder; Darren A. Natale; Peter B. McGarvey; Jian Zhang 051; Shawn W. Polson; Yuqi Wang; Cathy H. Wu (Bioinform., 2016)

Protein Ontology (PRO): enhancing and scaling up the representation of protein entities. - Darren A. Natale; Cecilia N. Arighi; Judith A. Blake; Jonathan P. Bona; Chuming Chen; Sheng-Chih Chen; Karen R. Christie; Julie Cowart; Peter D'Eustachio; Alexander D. Diehl; Harold J. Drabkin; William D. Duncan; et al. (Nucleic Acids Res., 2017)

Cloud-based Semantic Integration and Knowledge Discovery Systems in Precision Medicine. - Chuming Chen; Julie E. Cowart; Jia Ren; Sachin Gavali; Yuqi Wang; Hongzhan Huang; Cathy H. Wu; Leslie Arminski; Jian Zhang 051; Peter B. McGarvey (BCB, 2018)

UniProt: the universal protein knowledgebase in 2021. - Alex Bateman; Maria Jesus Martin; Sandra E. Orchard; Michele Magrane; Rahat Agivetova; Shadab Ahmad; Emanuele Alpi; Emily H. Bowler-Barnett; Ramona Britto; Borisas Bursteinas; Hema Bye-A-Jee; Ray Coetzee; et al. (Nucleic Acids Res., 2021)