A supervised hidden markov model framework for efficiently segmenting tiling array data in transcriptional and chIP-chip experiments: systematically incorporating validated biological knowledge. - Jiang Du 003; Joel S. Rozowsky; Jan O. Korbel; Zhengdong D. Zhang; Thomas E. Royce; Martin H. Schultz; Michael Snyder 001; Mark Gerstein (Bioinform., 2006)

Integrating Sequencing Technologies in Personal Genomics: Optimal Low Cost Reconstruction of Structural Variants. - Jiang Du 003; Robert D. Bjornson; Zhengdong D. Zhang; Yong Kong; Michael Snyder 001; Mark B. Gerstein (PLoS Comput. Biol., 2009)