OpenHI2 - Open source histopathological image platform. - Pargorn Puttapirat; Chen Li 011; Haichuan Zhang 001; Jingyi Deng; Yuxin Dong; Jiangbo Shi; Hongyu He; Zeyu Gao 001; Chunbao Wang 002; Xiangrong Zhang (BIBM, 2019)

Effects of annotation granularity in deep learning models for histopathological images. - Jiangbo Shi; Zeyu Gao 001; Haichuan Zhang 001; Pargorn Puttapirat; Chunbao Wang 002; Xiangrong Zhang; Chen Li 011 (BIBM, 2019)

OpenHI: open platform for histopathological image annotation. - Pargorn Puttapirat; Haichuan Zhang 001; Jingyi Deng; Yuxin Dong; Jiangbo Shi; Peiliang Lou; Chunbao Wang 002; Lixia Yao; Xiangrong Zhang; Chen Li 011 (Int. J. Data Min. Bioinform., 2019)

Renal Cell Carcinoma Detection and Subtyping with Minimal Point-Based Annotation in Whole-Slide Images. - Zeyu Gao 001; Pargorn Puttapirat; Jiangbo Shi; Chen Li 011 (MICCAI (5), 2020)

Meta Mask Correction for Nuclei Segmentation in Histopathological Image. - Jiangbo Shi; Chang Jia; Zeyu Gao 001; Tieliang Gong; Chunbao Wang 002; Chen Li 011 (BIBM, 2021)

Nuclei Grading of Clear Cell Renal Cell Carcinoma in Histopathological Image by Composite High-Resolution Network. - Zeyu Gao 001; Jiangbo Shi; Xianli Zhang; Yang Li 139; Haichuan Zhang 001; Jialun Wu; Chunbao Wang 002; Deyu Meng; Chen Li 011 (MICCAI (8), 2021)

Semi-Supervised Pixel Contrastive Learning Framework for Tissue Segmentation in Histopathological Image. - Jiangbo Shi; Tieliang Gong; Chunbao Wang 002; Chen Li 011 (IEEE J. Biomed. Health Informatics, 2023)

A Structure-Aware Hierarchical Graph-Based Multiple Instance Learning Framework for pT Staging in Histopathological Image. - Jiangbo Shi; Lufei Tang; Yang Li 139; Xianli Zhang; Zeyu Gao 001; Yefeng Zheng 001; Chunbao Wang 002; Tieliang Gong; Chen Li 011 (IEEE Trans. Medical Imaging, 2023)

MG-Trans: Multi-Scale Graph Transformer With Information Bottleneck for Whole Slide Image Classification. - Jiangbo Shi; Lufei Tang; Zeyu Gao 001; Yang Li 139; Chunbao Wang 002; Tieliang Gong; Chen Li 011; Huazhu Fu (IEEE Trans. Medical Imaging, 2023)

ViLa-MIL: Dual-scale Vision-Language Multiple Instance Learning for Whole Slide Image Classification. - Jiangbo Shi; Chen Li 011; Tieliang Gong; Yefeng Zheng 001; Huazhu Fu (CVPR, 2024)

E2-MIL: An explainable and evidential multiple instance learning framework for whole slide image classification. - Jiangbo Shi; Chen Li 011; Tieliang Gong; Huazhu Fu (Medical Image Anal., 2024)

Logic-based Benders decomposition methods for the distributed permutation flow shop scheduling problem with production and transportation cost. - Fuli Xiong; Jiangbo Shi; Lin Jing; An Ping (Comput. Oper. Res., 2025)

ST-Prompt Guided Histological Hypergraph Learning for Spatial Gene Expression Prediction. - Yi Niu; Jiashuai Liu; Yingkang Zhan; Jiangbo Shi; Di Zhang; Inês Machado; Mireia Crispin-Ortuzar; Chen Li 011; Zeyu Gao 001 (CoRR, 2025)

CoD-MIL: Chain-of-Diagnosis Prompting Multiple Instance Learning for Whole Slide Image Classification. - Jiangbo Shi; Chen Li 011; Tieliang Gong; Chunbao Wang 002; Huazhu Fu (IEEE Trans. Medical Imaging, 2025)

KPVG: Knowledge-prompted vision-genomics model for cancer survival prediction in whole slide images. - Jiangbo Shi; Chen Li 011; Yefeng Zheng 001; Huazhu Fu (Inf. Fusion, 2026)