Identifying spatial domain by adapting transcriptomics with histology through contrastive learning. - Yuansong Zeng; Rui Yin; Mai Luo; Jianing Chen 004; Zixiang Pan; Yutong Lu; Weijiang Yu; Yuedong Yang (Briefings Bioinform., 2023)

Graph learning of disentangled representation for accurately aligning multiple spatial slices. - Jianing Chen 004; Yuansong Zeng; Ningyuan Shangguan; Wenhao Zhou; Wenbing Li; Yuedong Yang (BCB, 2024)

Accurately Deciphering Novel Cell Type in Spatially Resolved Single-Cell Data Through Optimal Transport. - Mai Luo; Yuansong Zeng; Jianing Chen 004; Ningyuan Shangguan; Wenhao Zhou; Yuedong Yang (ISBRA (2), 2024)

Integrating single-cell multi-omics data through self-supervised clustering. - Yuansong Zeng; Jianing Chen 004; Zixiang Pan; Weijiang Yu; Yuedong Yang (Appl. Soft Comput., 2025)