NPInter v3.0: an upgraded database of noncoding RNA-associated interactions. - Yajing Hao 001; Wei Wu 025; Hui Li 038; Jiao Yuan; Jianjun Luo 001; Yi Zhao 013; Runsheng Chen (Database J. Biol. Databases Curation, 2016)

BioCircos.js: an interactive Circos JavaScript library for biological data visualization on web applications. - Ya Cui; Xiaowei Chen; Huaxia Luo; Zhen Fan 002; Jianjun Luo 001; Shunmin He; Haiyan Yue; Peng Zhang 050; Runsheng Chen (Bioinform., 2016)

LncVar: a database of genetic variation associated with long non-coding genes. - Xiaowei Chen; Yajing Hao 001; Ya Cui; Zhen Fan 002; Shunmin He; Jianjun Luo 001; Runsheng Chen (Bioinform., 2017)

Dynamic-BM: multispecies Dynamic BodyMap database from temporal RNA-seq data. - Ya Cui; Xiaowei Chen; Yiwei Niu; Dongpeng Wang; Huaxia Luo; Zhen Fan 002; Dan Wang; Wei Wu 025; XueYi Teng; Shunmin He; Jianjun Luo 001; Runsheng Chen (Briefings Bioinform., 2018)

SmProt: a database of small proteins encoded by annotated coding and non-coding RNA loci. - Yajing Hao 001; Lili Zhang 007; Yiwei Niu; Tanxi Cai; Jianjun Luo 001; Shunmin He; Bao Zhang; Dejiu Zhang; Yan Qin; Fuquan Yang; Runsheng Chen (Briefings Bioinform., 2018)

Episo: quantitative estimation of RNA 5-methylcytosine at isoform level by high-throughput sequencing of RNA treated with bisulfite. - Junfeng Liu; Ziyang An; Jianjun Luo 001; Jing Li; Feifei Li 009; Zhihua Zhang 007 (Bioinform., 2020)

Enzyme Repertoires and Genomic Insights into Lycium barbarum Pectin Polysaccharide Biosynthesis. - Haiyan Yue; Yiheng Tang; Aixuan Li; Lili Zhang 007; Yiwei Niu; Yiming Zhang; Hao Wang; Jianjun Luo 001; Yi Zhao 013; Shunmin He; Chang Chen; Runsheng Chen (Genom. Proteom. Bioinform., 2025)