RMD: a rice mutant database for functional analysis of the rice genome. - Jianwei Zhang 010; Caishun Li; Changyin Wu; Lizhong Xiong; Guoxing Chen; Qifa Zhang; Shiping Wang (Nucleic Acids Res., 2006)

Genome puzzle master (GPM): an integrated pipeline for building and editing pseudomolecules from fragmented sequences. - Jianwei Zhang 010; Dave Kudrna; Ting Mu; Weiming Li; Dario Copetti; Yeisoo Yu; Jose Luis Goicoechea; Yang Lei; Rod A. Wing (Bioinform., 2016)

DEGAP: Dynamic elongation of a genome assembly path. - Yicheng Huang; Ziyuan Wang; Monica A Schmidt; Handong Su; Lizhong Xiong; Jianwei Zhang 010 (Briefings Bioinform., 2024)

ESKtides: a comprehensive database and mining method for ESKAPE phage-derived antimicrobial peptides. - Hongfang Wu; Rongxian Chen; Xuejian Li; Yue Zhang; Jianwei Zhang 010; Yanbo Yang; Jun Wan; Yang Zhou; Huanchun Chen; Jinquan Li; Runze Li; Geng Zou (Database J. Biol. Databases Curation, 2024)