Single-Cell Co-expression Analysis Reveals Distinct Functional Modules, Co-regulation Mechanisms and Clinical Outcomes. - Jie Wang 066; Shuli Xia; Brian Arand; Heng Zhu; Raghu Machiraju; Kun Huang 001; Hongkai Ji; Jiang Qian (PLoS Comput. Biol., 2016)

ScaPD: a database for human scaffold proteins. - Xiaomei Han; Jenny Wang; Jie Wang 066; Sheng Liu; Jianfei Hu; Heng Zhu; Jiang Qian (BMC Bioinform., 2017)

LRLoop: a method to predict feedback loops in cell-cell communication. - Ying Xin; Pin Lyu; Junyao Jiang; Fengquan Zhou; Jie Wang 066; Seth Blackshaw; Jiang Qian (Bioinform., 2022)

CACIMAR: cross-species analysis of cell identities, markers, regulations, and interactions using single-cell RNA sequencing data. - Junyao Jiang; Jinlian Li; Sunan Huang; Fan Jiang; Yanran Liang; Xueli Xu; Jie Wang 066 (Briefings Bioinform., 2024)