A Comprehensive Analysis Workflow for Genome-Wide Screening Data from ChIP-Sequencing Experiments. - Hatice Gulcin Ozer; Doruk Bozdag; Terry Camerlengo; Jiejun Wu; Yi-Wen Huang; Timothy D. R. Hartley; Jeffrey D. Parvin; Tim Hui-Ming Huang; Ümit V. Çatalyürek; Kun Huang 001 (BICoB, 2009)

Comparative study on ChIP-seq data: normalization and binding pattern characterization. - Cenny Taslim; Jiejun Wu; Pearlly Yan; Greg Singer; Jeffrey D. Parvin; Tim Hui-Ming Huang; Shili Lin; Kun Huang 001 (Bioinform., 2009)

Inference of hierarchical regulatory network of estrogen-dependent breast cancer through ChIP-based data. - Fei Gu; Hang-Kai Hsu; Pei-Yin Hsu; Jiejun Wu; Yilin Ma; Jeffrey D. Parvin; Tim Hui-Ming Huang; Victor X. Jin (BMC Syst. Biol., 2010)

Comparing Multiple Chip-Sequencing Experiments. - Hatice Gulcin Ozer; Yi-Wen Huang; Jiejun Wu; Jeffrey D. Parvin; Tim Hui-Ming Huang; Kun Huang 001 (J. Bioinform. Comput. Biol., 2011)

Genome-wide mapping of RNA Pol-II promoter usage in mouse tissues by ChIP-seq. - Hao Sun 001; Jiejun Wu; Priyankara Wikramasinghe; Sharmistha Pal; Ravi Gupta; Anirban Bhattacharyya; Francisco J. Agosto-Perez; Louise C. Showe; Tim Hui-Ming Huang; Ramana V. Davuluri (Nucleic Acids Res., 2011)